Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2488 ATGGCCTCTTATAGGCCTTTCCCTCCTCCACCGGCGAGTCAAAACCCTATCGCACCACCACCACCTCCGCCGCAACAACGGGGGAATAATAATTGGGGTGGTTATGGTTACGGTGGCGGTGTTGGTGTTGGTGGAGATTCTTCTACTTCTTCATTCCCTCAAATACCTCCAAATTCAAATTATCAACATCATCAGCACCAGCATCAGCATCATCATGCTCCTCCTCCACCACCACCTTCAAATTACTATCCATATCCACCACCACCGCCTCCACCACCTGATAATTCATACCAGCCACCACCTCCGCCGCCACCTGGTCCTATGTATTATCCACCTAATAATCAATATAATCATCAACAACCACCGCCTCCGCCACCTCCTTTATCGCCGGGTGCTTCGATGCAGCCTCCACCGCCACCTCCTCCAGTGTCTCCGCCTCCTCCTCCGAACAACAATGAAGTGGAGAGGGGAGTCAATAAAGGGTCTTCTGGGAGACGTGATGTAGTTCCGCAGCATAAACAGCAGCATAAGCCTTCTCATGGGCATCCTCCAAGGAGGGTTGAGACGGAGGAAGAGAAGAGGTTGAGAAAGAAGAAGGAGTATGAGAAGCAAAGGCAAGAAGAAAAGCATAGGCAGCAACAGAAGAAGCTGAAGGAATCACAGAATAGTGTTTTGCAAAAGACTCAAATGGTGTCATCTGGGGGGACTGGAAAGGTGCATGGTTCTATTGCAGGGTCTCGAATGGGAGAGAGGAGAACTGCGCCCTTATTGGGCGGTGAGAGGGTTGAAAATAGGTTGAAAAAGCCCACCACTTTTTTGTGTAAACTCAGATTTCGAAATGAACTTCCGGATCCAACTGCTCAACCTAAGCTAATGGCGTTTAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCACTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCCGACCACCTCTTGCTCCAGAAGATGAAGATTTATTGCGAGATGATGAAGCTGTTACTCCTATGAAAAAAGATGGTATTAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTCGCTTGGCTTGTTAAAACACAATATATATCTCCTTTAAGCATGGAATCGGCCAAACAGTCGTTAACTGAAAAACAAGCTAAGGAGCTGAGAGACAGGAAGGGAGGCCGCAGTCTCTTGGAAAATCTTAACAATAGGGAAAGACAAATCAGGGAAATAGAAGCATCATTTGAAGCAGCTAAGTCCCAACCTGTTCATGCAACTAAAAAAGATTTGTACCCTATTGAGTTTATGCCATTGTTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCAACTGTTGATTCAGAAATGTACAGTAAGATGGACAAATCTGTTCGTGATGTCTCTGAATCAAGGGCAGTTATGAAAAGTTATGTTGCAACAAGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGTCCCAGCACCAGGGGAGTTGTCAAAGGATATATATGATGAAGATGAAGAAGTCTCTTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGAGGTGACGATGCACATGATCCCACAACATTCTTAGTTTCGTTTGATGAGTCAGAAGCTCGTTATTTGCCTCTTCCAACTAAACTAGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCGGGTGATGAGGTTGAACAATTTCCAGCTCCTGCTAGAGTGACTGTGAGGAGAAGATCAACCGTTGCTGCAATCGAGCGGAAGGATTCTGAGGTTTATACACGTTTAAAGGGAAATTCGTCCAAGAGGCTAGAAATGGATGACGATCTTGACGACCAACATAGAGCTGCAGAGCACCATGATAATTTCCAATCTAGTGGAGGAGAAGATGAAATGTCCGATTGA 1995 0.4471 MASYRPFPPPPASQNPIAPPPPPPQQRGNNNWGGYGYGGGVGVGGDSSTSSFPQIPPNSNYQHHQHQHQHHHAPPPPPPSNYYPYPPPPPPPPDNSYQPPPPPPPGPMYYPPNNQYNHQQPPPPPPPLSPGASMQPPPPPPPVSPPPPPNNNEVERGVNKGSSGRRDVVPQHKQQHKPSHGHPPRRVETEEEKRLRKKKEYEKQRQEEKHRQQQKKLKESQNSVLQKTQMVSSGGTGKVHGSIAGSRMGERRTAPLLGGERVENRLKKPTTFLCKLRFRNELPDPTAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAVTPMKKDGIKRKERPTDKGVAWLVKTQYISPLSMESAKQSLTEKQAKELRDRKGGRSLLENLNNRERQIREIEASFEAAKSQPVHATKKDLYPIEFMPLLPDFDRYDDQFVVAAFDNAPTVDSEMYSKMDKSVRDVSESRAVMKSYVATSSDPANPEKFLAYMVPAPGELSKDIYDEDEEVSYSWVREYHWDVRGDDAHDPTTFLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPAPARVTVRRRSTVAAIERKDSEVYTRLKGNSSKRLEMDDDLDDQHRAAEHHDNFQSSGGEDEMSD* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2488 664 Coils Coil 419 439 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 72 152 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 1 262 - -
Tpr5g2488 664 Pfam Paf1 272 650 IPR007133 GO:0006368|GO:0016570|GO:0016593
Tpr5g2488 664 MobiDBLite consensus disorder prediction 44 63 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 218 236 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 626 657 - -
Tpr5g2488 664 Coils Coil 187 223 - -
Tpr5g2488 664 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 134 663 IPR007133 GO:0006368|GO:0016570|GO:0016593
Tpr5g2488 664 MobiDBLite consensus disorder prediction 626 664 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 181 217 - -
Tpr5g2488 664 MobiDBLite consensus disorder prediction 159 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2488 K15174 - gmx:100800148 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2488 5 46576671 46582545 Tpr5g2488 5 46576671 46582545 ECH