Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2483 ATGGGGAGTTCTGAAGGGTTTGGAGCATCGTCAAAGCCTGCGAATTCTTCTTCGCAGGTGCCTCCTTCGAAACAATATGGTGTTACCAAGCCTATTTCAATGGCTGGACCAACCGTTGCTGATTTGAAAAGGACTCAAAAGTTGGAGAAGTTTCTCGCTGATTCCGGGCTATATGAGAGCAAGGAGGAGGCTTCCAAGAGAGAAGACGTGCTTCATCGACTTGGAGAGATAGTAAAAAGTTGGGTAAAGCAGCTTACTCGTCTGAAAGGGTATACTGATCGAATGGTGGAAGATGCAAATGCTGTCATAGTCACTTTTGGTTCTTATCGTCTTGGCGTTCATGGTCCTGGTGCTGACCTAGATACATTGTGTATTGGCCCATCCTATGTTAACCGGGAGGAGGATTTTTTCTACACATTGCATGGTATCCTAGCTTGCGTAGACGAAGTTACTGAACTGCAACCAATTCCAGATGCTCATGTCCCAGTTATGAAGTTCAAGTTTGACGGAATATCAATCGACCTTCTTTATGCAAGTATTTCTTGTTTGGTTGTACCTGAAGAATTGGATATATCTGATGTCTCTGTTCTACACAATGTTGATGAGCCTACTGTTCGAAGTTTGAATGGTTGTAGGGTTGCTGATCAAATTCTAAAGCTTGTTCCAAATGTTGAGTACTTTCGAACAACACTCCGGTGCTTAAAGTTTTGGGCCAAAAGACGCGGTGTTTATTCCAACGTGACAGGTTTTCTCGGTGGTGTTAACTGTGCACTTCTTGTAGCTCGGGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTATATACACAGTGGCGGTGGCCAAATCCAGTCATGTTATGCTCGATAGAGGAGAACGAGCTTGGGTTTCCTGTGTGGCATCCTCAAAAAAATCCTCGTGATCGATCGCATCTTATGCCAATTATAACTCCTGCCTATCCGTGCATGAATTCAACTTATAATGTTTCAACAAGCACACTTCGTGTTATGATGGAGCAGTTCCAATATGGAAACAAAATCTGTGAGGATATAGAACTGAATAAAGTCGGCTGGAGTGCTCTGTTTGAACCATACATTTTCTTTGAAGGCTACAAAAACTTTTTGCAAATTGACATAGTTGCTGCTGATGTTGATGACTTACGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGGACACTGACTTTAATGATTGAGCGTGATACTTTCGGGAAGTTGCAGTGCCATCCCGATCCTCAGGAGTATATTGATAATTCAAGGAACTGTGCACATAGTGCTTTCTTCATGGGCTTGCAGAGGAAACAGGGGGAGGTTGTTCAAGAAGGCCAGCAGTTTGATATACGTGGGACTGTCGAAGCATTTCGGCATTGTGTTAACATGTACAGTTTCTGGAAACCTGGAATGGACATGCATGTTTCACACATTCGTAGAAGGCAAATCCCAAGCTATGCGTTTCCTGATGGTTATAAACGATGTCGACCATCAAGGTCAACAGCACAACTGGAGAATAGTTCAAAATCAGTTCATGAAAATGAGGTTTCTGGGTCTGAACTTCGTGAGAGGAACTTAAAGAGGAAGCATGATGAAAGTGTGAGGCTGGATGTTTTACCAAAAAGGCGTTCTACCAGTCCTCCCGTGAAGAGCTTGACAGGAGGCGTCTCGTGCCTTGGTGCTGGTGACATGTCTGTTGATGCTGTATCCGATTGTCAAGAGTTAAAAAATGTTGGGAGGTTGAGTTCGTCTAGTAGTGAGCAAGACGAATTGGATAGAAGAATGTCTCCAGAAGCTGGGACTGAATGGGCATCAAATTCGAGTGTGGTTACATCTGTTTCAAGTGAAGGTGGCTCTCCTGAAGGTGGCTCTCCTGAAGGTGTTGGATCTGTATCAGTGGCAGGTTATGTTGAGGATAGCACCATGGATGTTGTTGAGGTGATGACCAACGGTAGATTCAAGGATAACACCTACAGGGCTAGTGGAAATAATGAAGTATTGCAAGACGCACTACATACACAGTTGGAGCCAATTGCAATGTCGGCGATGTTTCTTGACTCTAACGGAAGCTTTGACTCAGACGCCGTGCAAAAGACAGTGATAAGGAGACTGAGTCTAACATCGACAGCGTGA 2166 0.4423 MGSSEGFGASSKPANSSSQVPPSKQYGVTKPISMAGPTVADLKRTQKLEKFLADSGLYESKEEASKREDVLHRLGEIVKSWVKQLTRLKGYTDRMVEDANAVIVTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHGILACVDEVTELQPIPDAHVPVMKFKFDGISIDLLYASISCLVVPEELDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNCALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWHPQKNPRDRSHLMPIITPAYPCMNSTYNVSTSTLRVMMEQFQYGNKICEDIELNKVGWSALFEPYIFFEGYKNFLQIDIVAADVDDLRAWKGWVESRLRTLTLMIERDTFGKLQCHPDPQEYIDNSRNCAHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRHCVNMYSFWKPGMDMHVSHIRRRQIPSYAFPDGYKRCRPSRSTAQLENSSKSVHENEVSGSELRERNLKRKHDESVRLDVLPKRRSTSPPVKSLTGGVSCLGAGDMSVDAVSDCQELKNVGRLSSSSSEQDELDRRMSPEAGTEWASNSSVVTSVSSEGGSPEGGSPEGVGSVSVAGYVEDSTMDVVEVMTNGRFKDNTYRASGNNEVLQDALHTQLEPIAMSAMFLDSNGSFDSDAVQKTVIRRLSLTSTA* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2483 721 Gene3D Beta Polymerase, domain 2 59 215 IPR043519 -
Tpr5g2483 721 MobiDBLite consensus disorder prediction 510 563 - -
Tpr5g2483 721 CDD NT_PAP_TUTase 66 221 - -
Tpr5g2483 721 Pfam Poly(A) polymerase predicted RNA binding domain 374 415 IPR007010 GO:0003723|GO:0043631
Tpr5g2483 721 SUPERFAMILY PAP/OAS1 substrate-binding domain 222 371 - -
Tpr5g2483 721 Gene3D - 27 369 - -
Tpr5g2483 721 PANTHER NUCLEAR POLY(A) POLYMERASE 4 16 595 - -
Tpr5g2483 721 MobiDBLite consensus disorder prediction 526 550 - -
Tpr5g2483 721 Gene3D Poly(A) polymerase predicted RNA binding domain 374 489 - -
Tpr5g2483 721 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 374 498 IPR011068 GO:0003723|GO:0016779|GO:0031123
Tpr5g2483 721 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g2483 721 MobiDBLite consensus disorder prediction 510 525 - -
Tpr5g2483 721 PANTHER POLY A POLYMERASE 16 595 - -
Tpr5g2483 721 Pfam Nucleotidyltransferase domain 100 174 IPR002934 GO:0016779
Tpr5g2483 721 MobiDBLite consensus disorder prediction 589 639 - -
Tpr5g2483 721 MobiDBLite consensus disorder prediction 1 32 - -
Tpr5g2483 721 Pfam Poly(A) polymerase central domain 27 371 IPR007012 GO:0004652|GO:0043631
Tpr5g2483 721 SUPERFAMILY Nucleotidyltransferase 24 220 IPR043519 -
Tpr5g2483 721 MobiDBLite consensus disorder prediction 611 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2483 Tpr-Chr5 46532543 46537712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2483 K14376 - gmx:100783237 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2483 5 46532543 46537712 Tpr5g2483 5 46532543 46537712 ECH