Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2480 ATGTATAGAGCTACAGCTTCATCACTCAAAAGGCATCTCAAGGGCCGTGGTGGCTACTTGGGAGCAACTAGGTTTGCTACTTCAAGTGCTGTAGCTGCAAAGGTTGCTTCTGGTGGTTTGTTTAGCTGGCTTACCGGGGAGGTTTCTAGTTCACTTCCACCTCTTGATACACCACTTAGTTCTGTTGTTCTTCCTGATCCGCTACCAGATTATGTTGAACCAAGCAAGACTAAGATTACAACTCTTTCCAATGGACTTAAAATTGCTTCAGAGAACTCGCCGAACCCTACAGCCTCAATTGGGTTATATGTTGATTGTGGTTCAATCTATGAGACACCATTGTTAAGTGGGGCTTCGCATTTGCTAGAGAGAATGGCTTTCAAGAGCACGATTAACCGTAGTCACTTTCGTATTGTAAGGGAAACAGAAGCAATTGGTGGTAATATAGGAGCCTCGGCCTCTCGGGAACAAATGGGTTACACTTTTGATGCCTTGAAGACCTATGTTCCACAAATGGTTGAATTACTTGTTGACTGTGTAAGGAACCCAGCCTTCTTGGAATGGGAGGTCAATGAAGAGCTACGAAGAGTGAAAGCAGAGCTTGGAGAACTCTCAAACAATCCCCAGGGCATGCTATTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCATATCCTCTTTTGGCTCCTGAAGAAGCACTGAACAGATTGGATGGCCCCAGTTTAGAGGAATTTGTTGCTGAAAATTACACAGCTCCTAGAATGGTACTTGCTGCATCTGGAGTAGAGCATGAAGAGCTTCTAGCTGTTGCCGAGCCACTTCTCGCTGACCTGCCAAGTGTTCCTCGTCCCGAAGAACCAAAATCTACCTATGTTGGAGGTGATTTCCGTCGTCACGGTGAAGCAGGGGCTACACATGTTGCTATTGCTTTTGAAGTTCCCGGTGGCTGGCAAAAGGAGAGAGATGCTATAGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGTTCATTCTCAGCTGGGGGCCCCGGTAAAGGGATGCACTCAAGGCTATTTCTTCGCGTGTTGAATGAATATCAGCAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGACTATTTGGCATTTATGCGAGCACTAGCCCTGATTTTGTACCAAAAGCTGTAGAGTTAGCTGTCAGAGAACTAACATCACTTGCAACACCAGGACAAGTTTCACAGTCACAGCTTGAACGTGCCAAGCAATCTACAAAAACTGCAGTTCTCATGAATCTGGAATCTAGAATGATCGCCTCAGAAGACATAGGAAGGCAGATTTTGACTTATGGAGAAAGGAAACCTTTGGAGCAGTTCTTGAAGGCTGTAGATGAAATCACTATAAATGATATCACTAAAATTTCTGAAAGGATTATTTCCTCACCTTTGACTATGGCATCATATGGAGATGTTATTAATGTGCCGAGTTATGAAACTGTGAGCCGCATGTTCCATGCGAAATGA 1521 0.4425 MYRATASSLKRHLKGRGGYLGATRFATSSAVAAKVASGGLFSWLTGEVSSSLPPLDTPLSSVVLPDPLPDYVEPSKTKITTLSNGLKIASENSPNPTASIGLYVDCGSIYETPLLSGASHLLERMAFKSTINRSHFRIVRETEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLEWEVNEELRRVKAELGELSNNPQGMLLEAIHSAGYSGALAYPLLAPEEALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLAVAEPLLADLPSVPRPEEPKSTYVGGDFRRHGEAGATHVAIAFEVPGGWQKERDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLFLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFVPKAVELAVRELTSLATPGQVSQSQLERAKQSTKTAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITINDITKISERIISSPLTMASYGDVINVPSYETVSRMFHAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2480 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Tpr5g2480 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Tpr5g2480 506 Gene3D - 291 502 - -
Tpr5g2480 506 Gene3D - 69 278 - -
Tpr5g2480 506 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 18 505 IPR037715 GO:0006627
Tpr5g2480 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 298 497 IPR011249 GO:0046872
Tpr5g2480 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Tpr5g2480 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Tpr5g2480 506 PANTHER METALLOPROTEASE 18 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2480 Tpr-Chr5 46479261 46484036 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2480 K01412 - gmx:100794691 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2480 5 46479261 46484036 Tpr5g2480 5 46479261 46484036 ECH