Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2478 ATGGAAAAAATATATAGAAGATTTTTTAATGTGATAGTTAGAGAGGATAAAGGTATGAGGCCTATTGTACTCAAATGTGGTTTGGCTTTGGCCCTAACTTTTGCTGGTTTTCTCTACTCAAACCTTAGAACAAGAAGGATCAAACCTTCCCCTAAAGGGAACCTTCCAGGTCATGGGAGTGAAGCTAATTTACGAGGTATTAGAGCATCATCAAGTTCTTCCAACATCCGTTCAGAAGGAAATAATTTTGATACCGAAGAAACATGCATCAACAAGGTGGTATGTAGAAGTTCTCCAATTGGTGTCTCACCAAGAATTAAACAAAATGAAGAAAAAGACGACGAACTCAATGATCCTCCTGTAGCATATGTAAGTCTTGAGAAAGACGATTATGAGCAAGAGATCAGAAAATTGAGGAACATGGTCATGATGCTTCAAGAGAGGGAAAGAAGTCTCGAAGTTCAACTTCTTGAATACTGTGGTCTAAGAGAGCAAGAAACCGTTGTAATGGAGCTTCAAAACCGGTTAAAGATAAGTAATATGGAGACGAAGATGTTCAATCTAAAAGTTGAGACATTACAGTCTGAGAATAGGAGATTAGAGGCACAAATTTCTGATCACGCGAAAGTGGTTTCTGAACTTGAGTCTTCAAAAACAAAAGTGAAATTTTTGAAGAAGAAAATTAGGTATGAAGCGGAACAGAATAAGGAGCATATCATAATTCTTAAACAGAAAGTTTCCAAGTTGCAGGATCTTGAATCTAAAGCTGTTGCTAATGATCAAGAAATTCAAATGAAGTTGAAAAGGCTAAAGGATCTTGAAGATGAGGTGGAACAGTGGAAGAAATCTAATTTGCGATTGGAGAAGGACAATTCGGAGTTAGCTAGAAGATTGGATTCTACTCAGATCCTTGCAAATTCTGTTCTAGAAGATCCAGAAGCGGATGCTCTAAGGGAAGAAAGTGACCGTCTCAAGAGAGAGAACGAGAGAATGACGAAAGAAATTGAACAACTACAAGCTGATAAATGCACAGATCTTGAAGAACTAGTGTATTTAAGGTGGATAAATGCTTGTTTGAGACATGAATCAAGAAATTATCAACCTCCGACTGGTAAAACAGTTGCAAGGGACTTGAGTAAAAGTTTAAGTCCAGATTCTGAGAAGAAAGCTAAACAGCTTATACTTGAATATGCAAATAATGAAGGAAGAACTAGTAGCATTTCTGATGTTGATTCTGATCAATGGTCCTCCTCACAAGCTTCTTTTATAGATACTGATGAGTGTTCTCCTCTTGAAAACTCGTCCGATGCACGAGTCAACCACAACAGCGGCACAAACAAGTCGAAGATCTTTGGTAAACTTATGAAGCTGATGAGAGGCAAAGATAATAGTAGTAATCTCAGTAGTAGAGTTACATCTTTAGAAAAATCTAGATCTCGAGAATATAGTACTTACACTTCTCCACATGATACTGGAGCTTATAGGAGTGAGTATGGAACTCCTACCGAAACGTCTCGAAATTCTCTCGATCTCAACCGTTCCATGAAGGAATATAATAGGAGAAATTCAGATGTTGGAATCCCAAAGAATTTCAGTCCAAGCATAAGTGGTGCAGGAGATTTGAAAATTAGTTCTCATTCATTCTCCGAATCCTATAGCTCAGAGAAATCTAATTTGATCAAATATGCTGAAGCTCTAAAAAATTCTAGTTCTAGTGAAGAAACTTCAAAACATGCTATACGTAGAAGATCATCATCATATAGTTCATTTTAA 1773 0.3706 MEKIYRRFFNVIVREDKGMRPIVLKCGLALALTFAGFLYSNLRTRRIKPSPKGNLPGHGSEANLRGIRASSSSSNIRSEGNNFDTEETCINKVVCRSSPIGVSPRIKQNEEKDDELNDPPVAYVSLEKDDYEQEIRKLRNMVMMLQERERSLEVQLLEYCGLREQETVVMELQNRLKISNMETKMFNLKVETLQSENRRLEAQISDHAKVVSELESSKTKVKFLKKKIRYEAEQNKEHIIILKQKVSKLQDLESKAVANDQEIQMKLKRLKDLEDEVEQWKKSNLRLEKDNSELARRLDSTQILANSVLEDPEADALREESDRLKRENERMTKEIEQLQADKCTDLEELVYLRWINACLRHESRNYQPPTGKTVARDLSKSLSPDSEKKAKQLILEYANNEGRTSSISDVDSDQWSSSQASFIDTDECSPLENSSDARVNHNSGTNKSKIFGKLMKLMRGKDNSSNLSSRVTSLEKSRSREYSTYTSPHDTGAYRSEYGTPTETSRNSLDLNRSMKEYNRRNSDVGIPKNFSPSISGAGDLKISSHSFSESYSSEKSNLIKYAEALKNSSSSEETSKHAIRRRSSSYSSF* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2478 590 Coils Coil 314 341 - -
Tpr5g2478 590 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 7 590 - -
Tpr5g2478 590 MobiDBLite consensus disorder prediction 367 387 - -
Tpr5g2478 590 MobiDBLite consensus disorder prediction 567 590 - -
Tpr5g2478 590 Coils Coil 121 155 - -
Tpr5g2478 590 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 7 590 IPR040265 -
Tpr5g2478 590 MobiDBLite consensus disorder prediction 49 80 - -
Tpr5g2478 590 MobiDBLite consensus disorder prediction 65 80 - -
Tpr5g2478 590 MobiDBLite consensus disorder prediction 461 492 - -
Tpr5g2478 590 Coils Coil 162 217 - -
Tpr5g2478 590 Coils Coil 263 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2478 Tpr-Chr5 46460827 46464832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2478 - - gmx:100781632 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4870 7 56620018 56622767 Tpr5g2478 5 46460827 46464832 PCT