Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2449 ATGAAGTTTAGTAGTAACAAGATCTTAGATTTGATTGGAATTTGGAAGAAGGGAGAGGGAGAAGGAGAGAAAAAAACTATGCAGTCTAGAATGGAGGAAGGGAAGGACCCTGTTGCAACAAGAGTCACACACTCTAGGCCATTTCCTTTGAGACTTTTGCAATTTTTCTTACTCTTTTTGGTTATTGGAATTGGTGGTTCATTTGTTAGCATGTACATGATTAGGCATTTTGGTATTCATAATGTGGCTTTCGTACAATCGTCGATTAAGCCTTGTTTTCAGAAGCCGGCGATTGTAGAGAATTGGTTTAAGCCTCCATCTAGTTTGTTGCATAATATGACTGATGAGGAACTCTTTTGGAGGGCTTCTTTTGTTCCGAGGATTAAGAGTTATCCTTTTAAAAGAACTCCTAAAATTGCCTTCATGTTCTTGACTAAGGGACCTTTGCCTATGGCACCACTTTGGGAAAACTTCTTTAAAGGACATCAGAAGCTTTATAACATCTATGTTCATTCACTGCCTTCTTACAATCCTGATTTTTTGCCGTCGTCAGTTTTTTACCGGAGACAGATCCCTAGCCAGGTGGCAGAGTGGGGAATGATGAGTATGTGTGATGCTGAAAGACGACTTCTAGCTAATGCGTTGCTTGATTTCTCAAATGAATGGTTTGTGCTTCTATCTGAGTCCTGCATCCCTCTCCAAAACTTCAGCATTATACACCGTTACTTATCGCGATCAAGGTACAGCTTTATGGGCGCATTCGATGAACCTGGTCCATATGGAAGAGGACGTTACGACGAAAACATGGAACCTGAAATCAACATGAGTGACTGGCGTAAAGGGTCTCAGTGGTTCGAAATTAACCGAGAACTTGCTGTTAGGATAGTTGAAGACATAACTTACTATCCAAAACTCAAAGAATTCTGCACACCACACAAATGCTATGTCGATGAACACTATTTCCAGACAATGTTAACCATTAATACTCCTCATCTTTTGGCGAACCGAAGCCTCACTTATGTGGATTGGTCAAGAGGTGGTGCTCACCCTGCTACCTTTGGAAAGGATGACATCAACGAGGAATTCTTCAAGAAAATTTTGCAAGAACAGACATGTCTTTATAATAACCAGCCAACTTCACTTTGTTTCATATTTGCAAGAAAATTTGCACCTAATGCTTTAGGTCCTCTTTTAGATATAGCTCCGAAAGTTCTAGGAATAGGAAAGTTGAAGCATCCTTGA 1242 0.4026 MKFSSNKILDLIGIWKKGEGEGEKKTMQSRMEEGKDPVATRVTHSRPFPLRLLQFFLLFLVIGIGGSFVSMYMIRHFGIHNVAFVQSSIKPCFQKPAIVENWFKPPSSLLHNMTDEELFWRASFVPRIKSYPFKRTPKIAFMFLTKGPLPMAPLWENFFKGHQKLYNIYVHSLPSYNPDFLPSSVFYRRQIPSQVAEWGMMSMCDAERRLLANALLDFSNEWFVLLSESCIPLQNFSIIHRYLSRSRYSFMGAFDEPGPYGRGRYDENMEPEINMSDWRKGSQWFEINRELAVRIVEDITYYPKLKEFCTPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKDDINEEFFKKILQEQTCLYNNQPTSLCFIFARKFAPNALGPLLDIAPKVLGIGKLKHP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2449 413 Pfam Core-2/I-Branching enzyme 139 366 IPR003406 GO:0016020|GO:0016757
Tpr5g2449 413 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 30 405 IPR044174 GO:0016757
Tpr5g2449 413 PANTHER - 30 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2449 Tpr-Chr5 46107934 46110807 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2449 - - mtr:MTR_8g015500 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2449 5 46107934 46110807 Tpr5g2449 5 46107934 46110807 ECH