Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2442 ATGGGTAGTTCTGGAGAGTCTAACATCAATGGAATAAATGCTTCTGTGGGTGGTTTGGTTTGGGTTCGACGGCGAAATGGGTCGTGGTGGCCTGGTCGAATAATGAGTCTTGATGAATTGTCTGAGGGTTGTTTGGTTTCTCCAAGATCGGGTACTCCTGTTAAGTTGTTAGGTCGTGACGATGCTAGTGTGGATTGGTATAATCTTGAAAAATCAAAGCGGGTAAAAGCTTTTCGTTGCGTAGAGTATGCTGATTGCATTGAGAAGGCGAAGGCATCTGCTGCTGGTTTAGGCAAGAAGGCGGTGAAATATGCTCGAAGGGAAGATGCTATTCTTCATGCTCTTGAGCTAGAGAGCGCTTACCTGGACAAGGTACCCTTACCTTTATGCTCCAGATCAGATAAATCTGGCAGCGAACATGGTGAATCGGCTGGAGGATTACCCAGTATGTCCAATTCTGGTGATGGCAATGAGGATGTGACTGATGATTTGAGTGACTCTGAAGACAATTCTAATTCAGCTCCAGAATTGTCACAATCTGGTATATCTTTTGAAGAACCTAATCATAACGGTTCTTTAAAGATTCAACCTATGCAGGGAAGGAGGAGGAGAACACCTAATGATTCAGAAGACGATGGAACTGAAGGAGTGAAGCGAATGAGAGGACTTGAGGACCTCGGCATTGGTGTGGTGTCGAAGAGAAAGGGTCAGAGTTCAGAAAGTCCAACCGAGATAGCTCAGCATGTCAGTGCTTCCCTCAACGACTCAATCACCGGGAATGGCCTGGCGAATGGAACTTCTGTAAATGGTGTTAAGGCTTATTCTTCTCTGAAAAGGAAGAGATCACAAGTGGCAAATGCTCATGAACTCTTGAAAAGAAAAAATCGACGCCGGCCTTTGACAAAGGTTTTAGAGAGTACTGTCATGGTATCAGTTCCTGTCACTTGTGATCAGCTTCCCGGTTCAAGAAGTTCTCCACCATGCGGGATAACTGATGGAAAGATTTCAGTATTAGAATCTACTGATTCAAAGAAAAGTTCTGCAATGGAAATCAACAATTCAGATAGTGCTACCGAGGCTGCTTGTGAGAATGCAACTTCATTAACTGTTCATGACCAGGGTAGTAATTTTCCCCAAGTCGATCACAAGGTCAAGGAGAATGAAACTTCGGAAATACCAGGGCTAGCTGTCAATGATTCTTCTGATATGTTATTTGATGTGCCATTTGTTGGGATAGAGGAGGAGAAACTCACTCCAGGTTTGTCACCCACACTTGTTTCTTGCTCATCCGGCATGCCTCAAGTTAGTGCATTGGAACAACAATCTTGTCAAGCTAATCAATCAGAAGCTTTTCCATTGAGAAATGGGTTTAAGAATGAATCTGGTAGTACCAGTTCAGCTGTTGGTCACGATATTGTTGGCGATGGAGTAGAAAAAGATAGTTCAAAGTGGCAGTCAAAAGGAAAGAGAAATTTAAGACATACAAGTAAAAATGGAAAACAAGTCTCGAGAAAGTATATTGGAATGGATGGCGAATCCAAAGCTTATTTAACAGGAACAAGGAACTCAGATCGATTCTGTGAAGGTGCCGGTCAGAAACAGAAAATTGAATGGAATGTCACGGGTGTATCCAATGCCTCGTATAATTGTACTTCTCAAATCAAGTGCAAGCCGGTTGCTGAAGGTCAAGCAGAAGGGTTTCAGGACTTGATCAAGATTGTCAGGGGTACAGCAGCAGAACCACCTCAGAGATCACTCCCTTATCGCCAGTCACGCTTCACCCTTAACTCCAGATACGAAGTGCCAGATTTTCCTGGAAGAAACTGTACTGATGGAACATTATACAATGTTAAACTAGAAGCTAAATCCAGCTATCGGCCACAACATGTTCCTTTAGTTTCTCTTATGAGTAAATTAAATAGCAAAGCCATTATTGGACACCCTTTGACAGTTGATGTATTGGAGGATGGTCACTGCGATAAAATGTTGGGCGGCAGTGGAGGCGACGTTGAAGTTGGTGATATTTATTGTGCCGCGAAGCCAAAACCAGTAACCAGAAGAGTACCTTCTAAGAAATCACGTTTTTCACGTAGGAAATCTTCAAAGTCAAAGAAATCTGGGCTGTTGAATAAAAAAATCCGGAAGTTGTCCTCATTGACAGGTCACAGACAGTCAGAAGAGGAGAAAAAACCAGTGGTAGATAAGCTTAAGGGTCCTGTTATAGCTTGTATTCCTCTTACAATAGTATTCAGTAGGATACATGAGGCAGTGAGCGGTCAGGCAAGGTCGACACACCGTGCAGTATCAGCAACCAACAACAACCCATGA 2328 0.4317 MGSSGESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSEGCLVSPRSGTPVKLLGRDDASVDWYNLEKSKRVKAFRCVEYADCIEKAKASAAGLGKKAVKYARREDAILHALELESAYLDKVPLPLCSRSDKSGSEHGESAGGLPSMSNSGDGNEDVTDDLSDSEDNSNSAPELSQSGISFEEPNHNGSLKIQPMQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVSKRKGQSSESPTEIAQHVSASLNDSITGNGLANGTSVNGVKAYSSLKRKRSQVANAHELLKRKNRRRPLTKVLESTVMVSVPVTCDQLPGSRSSPPCGITDGKISVLESTDSKKSSAMEINNSDSATEAACENATSLTVHDQGSNFPQVDHKVKENETSEIPGLAVNDSSDMLFDVPFVGIEEEKLTPGLSPTLVSCSSGMPQVSALEQQSCQANQSEAFPLRNGFKNESGSTSSAVGHDIVGDGVEKDSSKWQSKGKRNLRHTSKNGKQVSRKYIGMDGESKAYLTGTRNSDRFCEGAGQKQKIEWNVTGVSNASYNCTSQIKCKPVAEGQAEGFQDLIKIVRGTAAEPPQRSLPYRQSRFTLNSRYEVPDFPGRNCTDGTLYNVKLEAKSSYRPQHVPLVSLMSKLNSKAIIGHPLTVDVLEDGHCDKMLGGSGGDVEVGDIYCAAKPKPVTRRVPSKKSRFSRRKSSKSKKSGLLNKKIRKLSSLTGHRQSEEEKKPVVDKLKGPVIACIPLTIVFSRIHEAVSGQARSTHRAVSATNNNP* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2442 775 MobiDBLite consensus disorder prediction 686 711 - -
Tpr5g2442 775 SUPERFAMILY Tudor/PWWP/MBT 15 119 - -
Tpr5g2442 775 MobiDBLite consensus disorder prediction 201 222 - -
Tpr5g2442 775 MobiDBLite consensus disorder prediction 167 195 - -
Tpr5g2442 775 Gene3D - 7 117 - -
Tpr5g2442 775 PANTHER T17B22.17 PROTEIN-RELATED 1 769 IPR044679 -
Tpr5g2442 775 MobiDBLite consensus disorder prediction 686 732 - -
Tpr5g2442 775 Pfam PWWP domain 18 107 IPR000313 -
Tpr5g2442 775 MobiDBLite consensus disorder prediction 476 502 - -
Tpr5g2442 775 MobiDBLite consensus disorder prediction 134 246 - -
Tpr5g2442 775 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
Tpr5g2442 775 Coils Coil 277 297 - -
Tpr5g2442 775 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2442 Tpr-Chr5 46065209 46070584 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2442 - - cam:101497471 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2442 5 46065209 46070584 Tpr5g2442 5 46065209 46070584 ECH