Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2440 ATGACAGACTACGCGCAAGAACAAGAAATGGAGATTGAAGCATTAGAAGCTATACTTATGGATGAATTCAAAGAAATACACTCTGGTGAAAGTGGTTTAAGCACTTCCAATAGGTGCTTCCAGATTAAAATCACTGCACAGGAGGAAGACGAAGATGGGTCAAGTACTAATCCAGCTCAACTGGCTTTGATCTTCGCGCACACAGAAAATTATCCCGATGAACCTCCACTTTTGAATGTGAGCAGTTTGCGAGGAATTGGGTCTGAAGATTTAAGGATTTTGAAAGACAAACTTCAACAAGAGGCATCTGAAAATCTTGGCATGGCTATGATCTACACACTTGTTAACTCAGCTAAAGAGTGGTTGACTGAGCGGTTTACTGAAGACTCAGATGGTGATGCTGAAGCAGAAGAGGCAGCCAAAGAAGATATAGTGATACCTCATGGAGAACCAGTTACTGTCGAAACTTTTTTGGCATGGCGGGAAAGGTTTGAAGCTGAACTTGCACTTGAGCGAGCCAAGTTAATGCCAGAGTCTGTGCTTGCTACTCCGAAGGAAAAGAAACTCAGTGGTAGACAGTGGTTTGAAAGTGGAAGGATGAAAGGTGCAGCTATTGTCACCGAGGAATTGGATGAGGATGACGAGGAAGATATTGACTTTGATGATGATGAGGATTTCGAAGATGATGAAGATGATATGCTTGAGCATTATCTCGCTGAAAAATCTGATTCATCCACACATTCTTCCTTGCGAGCGAGTTAA 762 0.4239 MTDYAQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQIKITAQEEDEDGSSTNPAQLALIFAHTENYPDEPPLLNVSSLRGIGSEDLRILKDKLQQEASENLGMAMIYTLVNSAKEWLTERFTEDSDGDAEAEEAAKEDIVIPHGEPVTVETFLAWRERFEAELALERAKLMPESVLATPKEKKLSGRQWFESGRMKGAAIVTEELDEDDEEDIDFDDDEDFEDDEDDMLEHYLAEKSDSSTHSSLRAS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2440 253 SMART RWD2001b 10 125 IPR006575 GO:0005515
Tpr5g2440 253 MobiDBLite consensus disorder prediction 208 232 - -
Tpr5g2440 253 Pfam RWD domain 6 122 IPR006575 GO:0005515
Tpr5g2440 253 Coils Coil 5 25 - -
Tpr5g2440 253 MobiDBLite consensus disorder prediction 205 232 - -
Tpr5g2440 253 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 2 245 - -
Tpr5g2440 253 Gene3D Ubiquitin Conjugating Enzyme 1 130 IPR016135 -
Tpr5g2440 253 PANTHER RWD DOMAIN-CONTAINING PROTEIN 2 245 IPR040213 -
Tpr5g2440 253 SUPERFAMILY UBC-like 1 124 IPR016135 -
Tpr5g2440 253 ProSiteProfiles RWD domain profile. 10 125 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2440 - - gmx:100813322 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2440 5 46045315 46052507 Tpr5g2440 5 46045315 46052507 ECH