Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2437 ATGTACGGCGGACCTTCCTCCAAATTAGGCCGCGGCGGCGGCCCAAAACGTCTCCGCAATTCATTCCCCCCTCCTCCACGTCACCGTCCACCTTCCTCCGCCAATTCTCGTCTCTCCCTCGGTGGCTCCGCCAATAAACCGCCACCGGCGGTGGAGGAAACTTTCAGCTTTGTATCTGGAAACAATCCCCCCGCTTTCTCTATGATCATAAGACTTGCTCCAGACCTTGTTGAAGAGATCAAGCGCGTGGAAGCACAAGGTGGCACTGCGCGTATGAAATTTGATCCTAACCCAAATAATCCCAATGGAAATATTATTGACTTAGGTGGGAAGGAGTTCAGATTTACGTGGTCGAGGGACGGTGATCTATGTGATATTTATGAACAGCGCCAAAGTGGTGTAGATGGAAATGGGTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAAGTGAATGTACAACGTATCTTGGACGAGTCAACTAAGAATCGCGTCAAAATGCGGTCCGAGGAAGCCGAACGCAAGCTGAAGTCACGCAATTATCCTTTGAAAGCAGATAACGCGGACGTTGGATCTCAAAACAACTTGACAGAAATGAGTACCAAATTTAGAAATAGTGAATCCGGGGTGAGCCATGATATTGATTTGGATGGTCGCAGGGAAAGCAACAGAAGAGTGCCAGCAAATGGTTCTAAGCAAGGCACAAAACGTGGAATGGTTTCCTCCCCTGTGAAAGAAAGTAAAAGACGAAGACCTAATTCAGGTGAAGAGGTGCCTGAAGGAAGAAAGGATTCAGTATTTGTAGATAGAAGTAATGGTGACCAAAAGAAGAGAGAATCCTCCTCAGACGAAAATAGTTGCTCTTATTCAAAGTTTGAAAAGGAGGAACCTGAATTAAAGGGACCTATAAGGACTTTCTCCCAATATAAAGAATATGCGCAGGAGTACCAGGATAAATATCAGAGTTACCTCTCCTTGCGCAAGATTTTGATGGATTACACGGATGAGTTTAACAAACTAGGTGTTGATTTAGAAAATGCTGAAAGAAGTGGGAATCAGGATAGATATGATGGCATTGCAGCACAAATTATGGAATCTTATAGGCGATGTGGATCGAGACACATGAGACTGAAGAAAATATTTCTTGTGATTCATGAAGAACTGCTGAGTGCCAAGCAAAGCATCAAAGACTTTGCTGATTGGTATAGATATACAGACTGGAAATACAAGATTACTATATTTGTTAGATGA 1248 0.4423 MYGGPSSKLGRGGGPKRLRNSFPPPPRHRPPSSANSRLSLGGSANKPPPAVEETFSFVSGNNPPAFSMIIRLAPDLVEEIKRVEAQGGTARMKFDPNPNNPNGNIIDLGGKEFRFTWSRDGDLCDIYEQRQSGVDGNGLLVESGCAWRKVNVQRILDESTKNRVKMRSEEAERKLKSRNYPLKADNADVGSQNNLTEMSTKFRNSESGVSHDIDLDGRRESNRRVPANGSKQGTKRGMVSSPVKESKRRRPNSGEEVPEGRKDSVFVDRSNGDQKKRESSSDENSCSYSKFEKEEPELKGPIRTFSQYKEYAQEYQDKYQSYLSLRKILMDYTDEFNKLGVDLENAERSGNQDRYDGIAAQIMESYRRCGSRHMRLKKIFLVIHEELLSAKQSIKDFADWYRYTDWKYKITIFVR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2437 415 Pfam Occludin homology domain 300 398 IPR010844 -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 186 206 - -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 207 225 - -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 1 48 - -
Tpr5g2437 415 Gene3D - 304 400 - -
Tpr5g2437 415 SUPERFAMILY occludin/ELL-like 301 399 - -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 162 293 - -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 162 181 - -
Tpr5g2437 415 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 7 178 - -
Tpr5g2437 415 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 182 400 - -
Tpr5g2437 415 MobiDBLite consensus disorder prediction 241 293 - -
Tpr5g2437 415 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 293 402 IPR010844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2437 Tpr-Chr5 46011589 46016678 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2437 - - mtr:MTR_8g015610 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2437 5 46011589 46016678 Tpr5g2437 5 46011589 46016678 ECH