Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2428 ATGTCTAATATTGTGGTTGTTTTCGACTTTGACAAAACTATCATTGATTGTGATAGTGATAATTGGGTCATTGATGAATTAGGTTTCACTGATTTGTTTAATCAGCTTCTTCCAACCATGCCTTGGAATTCTCTCATGGACAAGATGATGATGGAGCTTCATTCAAATGGAACAACCATTGAAGAAATTGAAAAGGTTCTTCATAGGATTCCAATTCATCACAGAATAGTACCTGCAATTAAATCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCCAATGTGTTTTTCATTGAAACAATTTTGAAGCATTTAGGAATAAGAGAATGCTTCTCAGAGATTAACACTAATCCTGGTTATGTTAATCAAGAAGGAAGATTAAGAATTTTGCCTTATCATGATTTCAATAAGGCTTCACATGGTTGTCCTCTCTGTCCTCCCAATATGTGCAAGGGTTTGATCATAGATAGAATCCAAAGTTCAATTCTTGAAGGGGATAATAATAAGAGGTTTATCTATCTTGGTGATGGTATTGGAGATTATTGTCCTAGCTTAAGGCTTAAAGAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCAGCTTGGGACTTAATATGTAAAGACCCTTCACTTCTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAGTTAGAACAAGTTTTGATGAAGTTGATTAACAAAATTATGATAGAGGAAAATGCTCAATTTATTTCTTCAGATTGCAAGCTACAATCTCTATCAATTCCTGTGCATGAAACTTTGCCAAAAGCTCTCTCAGTTAGGCCATAG 822 0.354 MSNIVVVFDFDKTIIDCDSDNWVIDELGFTDLFNQLLPTMPWNSLMDKMMMELHSNGTTIEEIEKVLHRIPIHHRIVPAIKSAHALGCDLRIVSDANVFFIETILKHLGIRECFSEINTNPGYVNQEGRLRILPYHDFNKASHGCPLCPPNMCKGLIIDRIQSSILEGDNNKRFIYLGDGIGDYCPSLRLKERDFMMPRKNFPAWDLICKDPSLLKAEIHGWSDGEELEQVLMKLINKIMIEENAQFISSDCKLQSLSIPVHETLPKALSVRP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2428 273 PANTHER INORGANIC PYROPHOSPHATASE 1 271 - -
Tpr5g2428 273 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 188 - -
Tpr5g2428 273 SUPERFAMILY HAD-like 4 191 IPR036412 -
Tpr5g2428 273 Gene3D - 1 189 IPR023214 -
Tpr5g2428 273 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Tpr5g2428 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 271 IPR016965 GO:0016791
Tpr5g2428 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Tpr5g2428 273 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 200 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2428 Tpr-Chr5 45910131 45912330 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2428 K13248 - gmx:100782134 488.034