Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2416 ATGGCTTCTCTTCTGTCAATGGGTGATTTTTCATTGATTTGTCTCAAGGATTTTGATTTAACTTCTTTATGTTCTCTAAGGAGCATAATAGACACTATCAATGTACTTTTTGTCTGTGTCTACTACACGTCTTTGGTAATCGGTTTTATCAGAAAAACTTCTGTATGTAGGAGCCAAACAAGAAGTTGGATTTTCCAACTTGTCTCAATCTGTTGTGCTCTTATTAGCATTACTTTTTTTGCTATTAGCTTGTGGGATCTCATATACAAAACTGGCAACTCTAACGAGCTGAGTTGGTTAGCTTGCATTATAAGAGGATTCATTTGGAATTCATTAACAGTTTCTTTGCTTATTCAGAGAGTCAAATGGATTAAAATACTAAACTCTGTCTGGTGGATATCTTCCTGTGTGTTGGTTTCAGCTCTCAACATTGAAATTCTGTTCAAAGAACATGCCATTGAAACATTTGATATTGTACAGTGGCTTGTGCATTTCCTTCTTCTATACTGTGCCTTAAAAAATATTGGTTACTTAGGAACTCATAATGTCCAAGAATGTATTTATGAGCCAGTATTAGCTCAAAATAATGAAACTAAACAAACAGGACTAGGCCATGCTACCTTTCCCAGCAAGTTGATTTTCTCCTGGGTTAATTCAATACTCAGTTTAGGTTACTCAAAGTCACTAGCTCTAGAAGACATACCCTCCCTTGTTTCCGAAGATGAAGCAGGCACTGCCTATCAAAGCTTTGTGCATGCATGGGAATCCCTTGTAAGGGAGACGACTAATAACAATACAAAGAACTTGGTTCTTTGGTCTGTAGTTAGAACTTACTTAAAAGAAAACATATTAATAGCATTTTATGCATTAATCAGAACTATTTCTGTTGCAGTTTCACCTCTAATACTTTATGCTTTTGTTAACTACTCAAATAGAACTGAGGTAGATCTCAAACAAGGTCTTTCCATAGTTGGTTTTCTGATTCTCACTAAATTGGCTGAGTCGTTGTCTCAAAGACATTGGTTCTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTGATGGTGGCAATTTATCAAAAACAGCTAAAGCTTTCAAATTTAGCAAGGGAAAGACATTCAACTGGCGAAATTGTGAATTACATTGCAATTGATGCATATAGAATGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTTGTGTATTGCAACTTGTTTTGTCAATTGCTATTCTTTTTGGTGTTGTAGGTATTGGTGCTCTTCCTGGTTTAGTGCCCCTTCTCATCTGTGGACTTCTCAATGTACCACTTGCAAGGATGCTACAAAATTGTCAGCTACAGTTTATGATTGCACAAGATGAACGTCTCAGATCAACTTCAGAGATTCTTAATAGTATGAAAATAATTAAGTTACAATCTTGGGAAGAAAAGTTCAAGAACGTAGTTGAGTCCCTACGAGATAAAGAATTCAAATGGCTGTCTAAGACACAGTTCCTGAAAGCTTTTGGAACATTTCTTTATTGGCTGTCTCCTACAGTTATTCCTGCTGTTGTCTTCCTTGGATGCGCTTATTTCAACAGTGCACCATTGAATGCTGAAACCATTTTTACAGTTCTTACAGCATTGAGGAACATGGGAGATCCTGTTCTTATGATCCCAGAGGCCCTATCTGTTATGATTCAGGTTAAGGTTTCCTTTGATCGCATCAACACATTTATGCTCGCTGAAGAGCTAAATAATGATGATAATGGAAGAAACATAAAGCAATGTTCAGTCAATGCTATGGCAATTCAAGCTGGCAACTTCATTTGGGATCATGAATCTGTGTCCCCCACTTTAAAAGATATGAATTTAGAGATAAAATGGGGACAAAAAATAGCAGTTTGTGGACCAGTTGGAGCCGGAAAATCATCTCTTCTGTATGCAATACTTGGAGAGATTCCTAAGATTTCAGGAACTGTTTATGTAGGCAGCACACTAGCCTATGTATCTCAATCTTCTTGGATACAAAGTGGAACAGTTCAAGATAATATACTCTTCGGCAAGCCAATGGACAAAGAAAGATATGAGAATGCTGTTAAAGTATGTGCGTTAGATAAGGATATTGGTGATTTTAGCTATGGTGATCTTACAGAAATAGGTCAGAGAGGGATTAACATAAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAACGATGCTGATATCTATCTCCTCGATGACCCTTTCAGTGCAGTTGATGCGCACACTGCTGCTATTCTGTTCAATGACTGTGTCATGACTGCTCTAAGAGAGAAAACAGTCATTCTTGTGACGCATCAAGTAGAGTTTCTCTCGGAAGTTGATACAATATTGGTAATGGAGGATGGAAAAGTTATTCAATCAGGTACTTATGAGAATCTCCTGACAGCTGGGACAGCCTTTGAACAACTTGTGAATGCCCATAAAGATGCAGTTACCGAGCTAAATCAAGATAATGAAAATAAAAGAGGTTCTGGAAATGATGTTTATGCTAATCCACAAGACTCTCATCCTTTATATCTCACTAAAAAGCAGACTGATGGGGAGATTTCTACCAAGGATCAACTTGAGGTACAACTCACAAAAGAGGAAGAAAAAGATATTGGTGATGTTGGCTGGAAGCCATTTTGGGATTATATCTCTTATTCCAGGATGTCATACATGTTGTGTTTTATCTTGTTAGCACAATCTGCTTTTATGGCTTTGCAGACTGCATCATCCTTTTGGCTTGCATTTGCCATTGAAATTCCAAAAGTAACTAGTGCCACCTTGATTGGAGTTTATTCATTAATTTCTTTTTCTAGCATTGTGTTTGTATATCTAAGGTCTTACTTAAATGCGCATCTCGGATTAAAAGCTTCTACGGCCTTCTTCTCAAGCTTCACTACATCTATCTTCAATTCCCCGATGATGTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACCAGAGCTTCATCAGATTTAAGTATTTTGGACTTTGATATTCCTCATTCCATCCTCTTTGCATTATCTGTAGCAATTGAAATTCTGGTAATAATTTGCATAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTGGCATCAATATTCATTCAGCAATATTATCAAGCAACTGCAAGGGAACTAATGCGGATCAATGGAACAACTAAAGCTCCAGTCGTGAATTTTGCAACTGAGACATCACTTGGAGTGGTTACTTTAAGAGCATTCAACATGGTAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCTAATGTGGCAATGGAATGGGTAGTTCTAAGGGTTGAAGCAATTCAAAATTTGACTGTCATCACTGCAGCTTTGTTGCTTGTTCTACTTCCTCGTGGATATGTGTCCCCAGGACTTGTGGGATTGTCTCTTTATTATGCTTTTATTTTGACAACAGCCCAAATATTTTGGACTCGATGGTTTTCCAACTTATCAAACCACATTATCTCTGTTGAAAGAATCACTCAATTCATTCACATTCCAGTCGAGCCTCCTGCCATTGTGGAGGATAACCGACCACCGTCTTCATGGCCTTCCAAGGGTAGGATTGATGTTCAAAGCTTAGAGATTAGATATTGTCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTACATTTCAAGAAGGAAGTAGGGTGGGAGTTGTGGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGACATTCTCATAGACGGGATTAATATATGCTCAATCGGGTTGAAAGATCTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAACATTAGGACAAACTTGGACCCTCTTGGCCTGTACTCGGATGATGAAATATGGAAGGCTTTGGAGAAATGTCACTTAAAGGAAACCATCAGCAGGCTACCGAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAGCGGCAACTGTTTTGTCTTGGAAGGGTACTACTTAAGAGGAACAGAATTCTAGTTCTGGATGAAGCGACAGCATCCATTGATTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACCGTTGCTCACAGAATTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTCATGGGAAACTGGTGGAATATGACGAGCCTTCAAAGCTAATGAACACCAACTCTTCATTCTCTAAGTTGGTAGCTGAATATTGGTCTAGCTGCACCAAGAATTCCTTCACAAACATAAGCAAACAGCAACTATGA 4410 0.3844 MASLLSMGDFSLICLKDFDLTSLCSLRSIIDTINVLFVCVYYTSLVIGFIRKTSVCRSQTRSWIFQLVSICCALISITFFAISLWDLIYKTGNSNELSWLACIIRGFIWNSLTVSLLIQRVKWIKILNSVWWISSCVLVSALNIEILFKEHAIETFDIVQWLVHFLLLYCALKNIGYLGTHNVQECIYEPVLAQNNETKQTGLGHATFPSKLIFSWVNSILSLGYSKSLALEDIPSLVSEDEAGTAYQSFVHAWESLVRETTNNNTKNLVLWSVVRTYLKENILIAFYALIRTISVAVSPLILYAFVNYSNRTEVDLKQGLSIVGFLILTKLAESLSQRHWFFNSRRSGMKMRSALMVAIYQKQLKLSNLARERHSTGEIVNYIAIDAYRMGEFPWWFHITWTCVLQLVLSIAILFGVVGIGALPGLVPLLICGLLNVPLARMLQNCQLQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNVVESLRDKEFKWLSKTQFLKAFGTFLYWLSPTVIPAVVFLGCAYFNSAPLNAETIFTVLTALRNMGDPVLMIPEALSVMIQVKVSFDRINTFMLAEELNNDDNGRNIKQCSVNAMAIQAGNFIWDHESVSPTLKDMNLEIKWGQKIAVCGPVGAGKSSLLYAILGEIPKISGTVYVGSTLAYVSQSSWIQSGTVQDNILFGKPMDKERYENAVKVCALDKDIGDFSYGDLTEIGQRGINISGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEDGKVIQSGTYENLLTAGTAFEQLVNAHKDAVTELNQDNENKRGSGNDVYANPQDSHPLYLTKKQTDGEISTKDQLEVQLTKEEEKDIGDVGWKPFWDYISYSRMSYMLCFILLAQSAFMALQTASSFWLAFAIEIPKVTSATLIGVYSLISFSSIVFVYLRSYLNAHLGLKASTAFFSSFTTSIFNSPMMFFDSTPVGRILTRASSDLSILDFDIPHSILFALSVAIEILVIICIMVSVTWQVLIVAVPAMVASIFIQQYYQATARELMRINGTTKAPVVNFATETSLGVVTLRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWVVLRVEAIQNLTVITAALLLVLLPRGYVSPGLVGLSLYYAFILTTAQIFWTRWFSNLSNHIISVERITQFIHIPVEPPAIVEDNRPPSSWPSKGRIDVQSLEIRYCPNAPLVLKGITCTFQEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGNIRTNLDPLGLYSDDEIWKALEKCHLKETISRLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRIPTVIDSDMVMVLSHGKLVEYDEPSKLMNTNSSFSKLVAEYWSSCTKNSFTNISKQQL* 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2416 1469 CDD ABC_6TM_ABCC_D2 902 1192 IPR044726 GO:0140359
Tpr5g2416 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 283 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g2416 1469 SUPERFAMILY ABC transporter transmembrane region 888 1199 IPR036640 GO:0005524|GO:0016021
Tpr5g2416 1469 CDD ABCC_MRP_domain1 598 798 - -
Tpr5g2416 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1219 1451 IPR003439 GO:0005524
Tpr5g2416 1469 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 62 1454 - -
Tpr5g2416 1469 Gene3D - 1200 1451 IPR027417 -
Tpr5g2416 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 600 821 IPR003439 GO:0005524
Tpr5g2416 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 905 1167 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g2416 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 62 1454 - -
Tpr5g2416 1469 Pfam ABC transporter 616 750 IPR003439 GO:0005524
Tpr5g2416 1469 Pfam ABC transporter 1234 1382 IPR003439 GO:0005524
Tpr5g2416 1469 Gene3D ABC transporter type 1, transmembrane domain 865 1197 IPR036640 GO:0005524|GO:0016021
Tpr5g2416 1469 Gene3D ABC transporter type 1, transmembrane domain 259 581 IPR036640 GO:0005524|GO:0016021
Tpr5g2416 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1450 IPR027417 -
Tpr5g2416 1469 Pfam ABC transporter transmembrane region 284 543 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g2416 1469 Pfam ABC transporter transmembrane region 903 1166 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr5g2416 1469 Gene3D - 605 845 IPR027417 -
Tpr5g2416 1469 CDD ABCC_MRP_domain2 1215 1435 - -
Tpr5g2416 1469 ProSitePatterns ABC transporters family signature. 723 737 IPR017871 GO:0005524
Tpr5g2416 1469 SUPERFAMILY ABC transporter transmembrane region 271 572 IPR036640 GO:0005524|GO:0016021
Tpr5g2416 1469 CDD ABC_6TM_ABCC_D1 284 572 IPR044746 GO:0140359
Tpr5g2416 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 821 IPR027417 -
Tpr5g2416 1469 SMART AAA_5 1243 1428 IPR003593 -
Tpr5g2416 1469 SMART AAA_5 625 798 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2416 Tpr-Chr5 45800226 45806377 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2416 614 843 Calmodulin-binding Proteins AT2G36910 27.273 2.35e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2416 - - gmx:100784827 2283.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2416 5 45800226 45806377 Tpr5g2416 5 45800226 45806377 ECH