Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2397 ATGGTTTATTCCACCACCATGACAACAACCTACGGCACAATCCCAACATCACCAACACTGCCAACACCGCCAAAACTCGAATACATAACACGTGGCAAACAGAGAATCAAAGCCGGCTTAGGAACTCGTCGACCATGGAAAACCATGTTCGATCTCTGGTCACTTGGTATCCCCACGAATGGACTACCGGAAGCAATTTCACGGATTCGTGTCAATATATCATACTTCCGTATGAACTACACTATGGTGATGCTTCTGATCTTGTTTCTAAGCCTTTTATGGCACCCGATATCGCTTATTGTTTTCGTTCTTCTCATGGCGGCATGGTTGTTTTTCTACTTCCTACGTGATCAGCCGGTAATTCTATGGGGTCGACTTGTTGATGATCGGCTTGTGGTTGTTTTCATGGCGTTTGTTACGGTTGGACTGTTGCTTCTTACGCAAGCTACGGTTAATATTGTTGTTGCGGTTAGTGTCGCGATTGTGGTTGTGGTGGCGCATGCTGCGTTTAGGAAGACAGGGGATTTGTTCTTTGAGGAAGAAGAAGAAGTCATTGTTTCAGTTGCTTCTTGA 573 0.452 MVYSTTMTTTYGTIPTSPTLPTPPKLEYITRGKQRIKAGLGTRRPWKTMFDLWSLGIPTNGLPEAISRIRVNISYFRMNYTMVMLLILFLSLLWHPISLIVFVLLMAAWLFFYFLRDQPVILWGRLVDDRLVVVFMAFVTVGLLLLTQATVNIVVAVSVAIVVVVAHAAFRKTGDLFFEEEEEVIVSVAS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2397 190 PANTHER PRA1 FAMILY PROTEIN 7 186 - -
Tpr5g2397 190 Pfam PRA1 family protein 40 180 IPR004895 -
Tpr5g2397 190 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 7 186 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2397 Tpr-Chr5 45624592 45625397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2397 K20359 - gmx:100789765 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2397 5 45624592 45625397 Tpr5g2397 5 45624592 45625397 ECH
Tpr7g4849 7 56463063 56463958 Tpr5g2397 5 45624592 45625397 PCT