Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2357 ATGCAGAAAACTAATCTTCTGGAATCTGGTTCTATCATGAAGAGGTCTAAAAGTAAAAAGACAGCTTTGGCTTCTCAAAATGTGTATGATTGCGTTGCGACGGGACATGAGGACAGGCTCGGCGACATGCCAGATTGCATTCTTCATCATATTTTGTCGTTTATGGAGACAAGACACGCAATTCGAACTTGTGGTTTATCGAAAAGGTGGAGGTATATTTGGACTTCAATTCCCTGCTTGTACTTCAACAGCAAATCATTCACACGGTTGGTTGATTTCAAGAAGTTTGTATTGTGGGTTCTATCTCATCGCGATAATTCTCATGTCAAAGTTCTCATTTACTATCGCTTTGGGGTAGATTACGCGACAGATCAGTATCTTTTCAATAAGGTTATTGAATATGCAGCATTACATGGTGTCCAAGAAATCAGAATTAATCTTCGGGCAAAAACCTCTGGCTGTCCACCAATTGAAATTCCTTTGCCTCTTTTTACTTGCCAATCGTTGAAAAGGCTCGAGTTAAAAGATTGCCAACCTACCAATATCTCATCTCCTTTTGGTTGTAAATCATTGGACACATTGCACCTGGAACATTTTTCAATGTTTCCTACTGCAGCCGACTTTTCAAATCCATTTGCAAGTTTGTCCGAACTTTTTGGTTTTACAACATTGACAGCATTGCACCTAAATAACTTTGCGCTATGTTATACGGGAATGGAGTGTCTGGATCCATTTGCTAAATGTTTCAATTTGAAAATTTTGCAATTAAGTGAAATGTCCTTTAAGTCAGATTTGAGTCCTAAGGATTTTGTGATATCTGCTCCCAAACTCAGTAACTTGAGTCTTATTTGCAACCGATTTAGATGTAAGATTGTAGTTGCTTCACCAAAGCTTCTCAATTTCACTTACTTGTATTCCACACCATGTGCCTTCTTTGAGTATAGTCTTCCTTCTTTGGATGGTTTGATCATTGATATTCATGAATTGCCCGAGCCTTTGGAAAAATCTCATCGAAATAAAAGAGAGGAGACTTTACATGGTTTGATCAATATGTTACGGGGACATCATAAGGCTGAAGCTGTTAAACTATCCTTCTGTACAGTTGCGGTTACATGTGGGGCTGCAGCCTTAGAAAAGCCGGAATGTTTGTCTTATAGTAAATGGAAGTCATTGGACTTTGGAGTGGGATCAACATATAAAATCTTCATCAACAAACTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGTAGACTTCGAGATTGTGAATATTTAG 1284 0.3847 MQKTNLLESGSIMKRSKSKKTALASQNVYDCVATGHEDRLGDMPDCILHHILSFMETRHAIRTCGLSKRWRYIWTSIPCLYFNSKSFTRLVDFKKFVLWVLSHRDNSHVKVLIYYRFGVDYATDQYLFNKVIEYAALHGVQEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCQPTNISSPFGCKSLDTLHLEHFSMFPTAADFSNPFASLSELFGFTTLTALHLNNFALCYTGMECLDPFAKCFNLKILQLSEMSFKSDLSPKDFVISAPKLSNLSLICNRFRCKIVVASPKLLNFTYLYSTPCAFFEYSLPSLDGLIIDIHELPEPLEKSHRNKREETLHGLINMLRGHHKAEAVKLSFCTVAVTCGAAALEKPECLSYSKWKSLDFGVGSTYKIFINKLDHITAYFRNCSQHVDFEIVNI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2357 427 SUPERFAMILY F-box domain 36 89 IPR036047 GO:0005515
Tpr5g2357 427 PANTHER F-BOX PROTEIN-LIKE 24 427 - -
Tpr5g2357 427 PANTHER CYCLIN-LIKE F-BOX 24 427 - -
Tpr5g2357 427 Pfam F-box domain 42 78 IPR001810 GO:0005515
Tpr5g2357 427 Gene3D Ribonuclease Inhibitor 130 367 IPR032675 -
Tpr5g2357 427 ProSiteProfiles F-box domain profile. 37 90 IPR001810 GO:0005515
Tpr5g2357 427 SMART fbox_2 43 84 IPR001810 GO:0005515
Tpr5g2357 427 SUPERFAMILY RNI-like 152 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2357 Tpr-Chr5 45113511 45117781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2357 38 201 EF-hand Containing Proteins AT5G41840 26.486 4.85e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2357 - - vun:114167379 679.478