Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2355 ATGAATATATTCTCTACTATTTGGTTATTGCCTCTCTTCACTTTCATTTATGTCAATGATATTCTTCCTATTGAAGCTACTCACAATGTTTATAGAAACCTTCAAAATTCATCTTCTGATTTAACAGATCAAACTTACAGAACTGGTTATCATTTCCAACCTCCCAAGAATTGGATCAATGATCCTAATGGACCAATGCTTTACAAAGGGTACTATCATCTATTCTATCAATACAATCCTAAAGGTGCTGTTTGGGGAAATATTGTGTGGGCACATTCAATTTCAACTGATCTTATTAACTGGACCCCACTGGATCCAGCCATCTTTCCATCTCAACCGTCCGATGTAAATGGTGTTTGGTCAGGATCAGCCACAATATTACATGGTAACAAACCAGCTATTTTGTACACTGGAATTAATAAACTTAATCAACAAGTACAAGATATAGCATACCCTAAAAATTTAAATGACCCTTTTCTTAGGGAATGGATTAAGTCACCAAAAAATCCATTAATGGAACCAACTATTGAAAATAAAATTAATGCAAGTTCATTTAGAGACCCTACTACTGGTTGGTTAGGAAAAGATGGACATTGGAGAATACTTGTTGGTAACAAAAATAATACTAGAGGAATTGCACTTTTATATAAGAGTAAAGATTTTATTAATTGGATTAAATCAGAAAACCCTTTACATTCAGCTGAGGGTACTGGAATGTGGGAGTGTCCTGATTTTTTTCCAGTTTTGAAAATTGGTACATTTGGTGTTGACACATCATTAAATAATGATAAGGTTAGACATGTTTTGAAGGTTAGTTTAGATGATACAAAACATGATCATTATCTAATTGGGAGTTATGATGAAGGTAAAGACAAATTTACCCCTGATCATGGGTTTGAGGAGGTTAGTAGTGAACATGTTTTGAGATATGACTATGGAAAATATTATGCTTCAAAAACTTTCTTTGATTATGGGAAGAATAGAAGGATTTTGCTTGGTTGGGCTAATGAATCTTCAAGACCTGATTATGATATCAAGAAAGGATGGTCAGGAATCCATACAATTCCAAGGACAATTTGGTTGCACAAGTCAGGAAAACAGTTGGTACAATGGCCAGTTGTGGAACTTGAGAAGCTACGACTAAATCATGTTAACTTGCCCGCCAAAGTTCTCAAGGGAGGTGAACTGTTGCAAATTAATGGTGTCACAGCAGCACAGGCTGATGTTGAAATTTCATTTGAAGTGAATAACATTGGAAAGGCTGAAGTTTTGGACAAATGGACAGATCCTCAAATTCTATGTAGCCAAAGTTCATCAAGAAAAAATGGATTGGGACCTTTTGGTCTTCTTGCTTTTGCTTCAAAGGGATTGGAAGAGTTCACATCAGTGTTTTTCAGAATATTCAAATACCAACAAAAACCATTGGTGCTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAAGATAATGATTTGACCACTTATGGAACTTTTATTGATGTGGATGTTCTGAATGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGAAGAGCATGCATCACATCTAGAGTTTATCCCACATTGGCCATCAATGACAAAGCATTACTTTATGCTTTCAATAATGGAACTACTGATATAAAGATCACAAGCTTGAATGCTTGGAGCATGAAGAAAGCACAATTAAATGGAAAATTATAA 1731 0.3518 MNIFSTIWLLPLFTFIYVNDILPIEATHNVYRNLQNSSSDLTDQTYRTGYHFQPPKNWINDPNGPMLYKGYYHLFYQYNPKGAVWGNIVWAHSISTDLINWTPLDPAIFPSQPSDVNGVWSGSATILHGNKPAILYTGINKLNQQVQDIAYPKNLNDPFLREWIKSPKNPLMEPTIENKINASSFRDPTTGWLGKDGHWRILVGNKNNTRGIALLYKSKDFINWIKSENPLHSAEGTGMWECPDFFPVLKIGTFGVDTSLNNDKVRHVLKVSLDDTKHDHYLIGSYDEGKDKFTPDHGFEEVSSEHVLRYDYGKYYASKTFFDYGKNRRILLGWANESSRPDYDIKKGWSGIHTIPRTIWLHKSGKQLVQWPVVELEKLRLNHVNLPAKVLKGGELLQINGVTAAQADVEISFEVNNIGKAEVLDKWTDPQILCSQSSSRKNGLGPFGLLAFASKGLEEFTSVFFRIFKYQQKPLVLFCSDQSRSSLNKDNDLTTYGTFIDVDVLNEKLSLRSLIDHSVVESFGGEGRACITSRVYPTLAINDKALLYAFNNGTTDIKITSLNAWSMKKAQLNGKL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2355 576 CDD GH32_Fruct1-like 57 361 - -
Tpr5g2355 576 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 372 IPR013148 -
Tpr5g2355 576 PANTHER CELL-WALL INVERTASE 4 573 - -
Tpr5g2355 576 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 569 IPR013320 -
Tpr5g2355 576 Pfam Glycosyl hydrolases family 32 C terminal 375 566 IPR013189 -
Tpr5g2355 576 ProSitePatterns Glycosyl hydrolases family 32 active site. 51 64 IPR018053 GO:0004553|GO:0005975
Tpr5g2355 576 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 573 - -
Tpr5g2355 576 SMART glyco_32 51 527 IPR001362 GO:0004553|GO:0005975
Tpr5g2355 576 Gene3D Glycosyl hydrolase domain; family 43 55 382 IPR023296 -
Tpr5g2355 576 Gene3D - 383 567 - -
Tpr5g2355 576 SUPERFAMILY Arabinanase/levansucrase/invertase 42 373 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2355 Tpr-Chr5 45062299 45087163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2355 66 573 Glycoside Hydrolase AT3G13790 64.603 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2355 K01193 - gmx:100776791 914.45