Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2348 ATGCAAATGGTAACAATAAGACAAATGGATTATGAATCTAAAGAAGTTGATGCTACTACATTAAGAACAATGAGCTTCAAGAGTGAAAGAAATATAGATGAATTATATAATCAACAAGGGTTAGATGAAGAAGCTATAGTTGAAGAATCAACATGTTCAAAGAGAAGGAAAATTGGGAATTTGAAACTTCAAACTACATTCTCATTCAAATATTTAGTTACAAATAACTCTGATTCAAAACAAGGTTTTGTTGATGATGTTTTCAATAAACAAAGTCCTTCAATTTTGTTAGATAAACCTGAAATTTGGTTTTCACCAAAATCCATTGGAGAGCTTGATGTTGCAGCAATAAAGCTTCAAAAAGTTTACAAAAGTTATAGAACTAGAAGAAATTTGGCTGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGCCTTAGATTTTGCTTCTCTAAGTAGGTGCTCAATATCACATTTTGATTCAGTTAAGTCAGAAACAGCTCTTTCAAAATGGGCTAGAGCTAGGACTATGGCTGCTAAGGTGGGAAAAGGATTGTGCAAAGATGATAAAGCACAAAAATTAGCTCTTAGACATTGGCTTGAAGCTATAGATCCTCGTCATCGATATGGACACAACTTACACTTGTATTATAATGTTTGGTTTCATAGCCAGAGCACACAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGAAAAGAAGTAAATCTTGATAAGTGTCCAAGAAATGAATTACAGAAGCAGTGTATAAAGTACCTTGGACCTAAAGAAAGGGAAGTATATGAAGTGGTTATAGAAGAAGGAAGGTTTGTTTTTAAAAAAAGCAAGAACCATGTACACACTTTTGAGGGATCTAAGTGGATTTTTGTTCTTAGCTCATCAAGAATTTTGTATGTTGGTGAGAAAAAGAAAGGGCAATTTCAACACTCAAGTTTTCTAGCTGGAGGTGCTACTATTGCATCTGGAAGATTAGTTGTCCAAAATGGTGTTCTTAATGCTATATGGCCCTATAGTGGACATTATCGTCCTACAAAGAAGAATTTCATGGAATTCATAGGCTTCTTGATGGAACACAATGTGGACTTAACAAATGTAAAGAAGTATCCAATTGATGATGATGTCCCACCTTCAGAACATGTTGACAAGGAGCTTCAATTTGAGTCCACAAATACTACTAATGCAAATTCAAGTGACTCTACCAAAACATGCAACCAAAATAATGTGACAACTTCACAACATAAAGAGTGCAAATCATTGTCAAGCAAATGGACCACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGGGAGTACCCTACAAAACTTCAAGCTAAGGCACTTGAACAACTCAATTTATCACCAAGAGTTAACATTGGAAAAGTTGCTAATAGGACTCCCATTCCTTCACCAAGACCTAGTCTAAAAATCCACTTGTCTCCTAGACTTGTGCATATGGGAATTCCAAGTCCAAGAGTACATATTACTCCCGCTAATTAG 1515 0.3571 MQMVTIRQMDYESKEVDATTLRTMSFKSERNIDELYNQQGLDEEAIVEESTCSKRRKIGNLKLQTTFSFKYLVTNNSDSKQGFVDDVFNKQSPSILLDKPEIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFASLSRCSISHFDSVKSETALSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYNVWFHSQSTQPFFYWLDVGDGKEVNLDKCPRNELQKQCIKYLGPKEREVYEVVIEEGRFVFKKSKNHVHTFEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVVQNGVLNAIWPYSGHYRPTKKNFMEFIGFLMEHNVDLTNVKKYPIDDDVPPSEHVDKELQFESTNTTNANSSDSTKTCNQNNVTTSQHKECKSLSSKWTTGAGPRIGCVREYPTKLQAKALEQLNLSPRVNIGKVANRTPIPSPRPSLKIHLSPRLVHMGIPSPRVHITPAN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2348 504 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 3 503 - -
Tpr5g2348 504 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 3 503 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2348 Tpr-Chr5 44990260 44995567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2348 - - ccaj:109809343 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2348 5 44990260 44995567 Tpr7g4821 7 56238475 56244094 PCT