Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2300 ATGAGTTTTGAACGATTGAATACCCCCAAGTCTGGTTTTAGAAAGTTCTTTCAGTCTTTAGATGAGTGGTTTGAATACAAAGATAAAGGTAAATGGATAGAAGATATGAAAGGTAGCATAATTTTAGCAGCTTCCATGATAGCAACCATGACATTTTCACTCGGTACTAATCCACCCGGCGGCATCGTGAGTGTTAGTCTCGAGAACGTATCTAGTTTCGAATCTTTCGATGAACTTTGTTCTAATGTCACCGGAATATGCGCCGGATCAGCGATCTTGGGTAGTTTGTACACTAATACCTATGTTAGATTTTTGGTATGTAATACAATTTGTTTCATTGCAGCAATTAGTGTTATTTTCTTGCTTGTTAGTGGAATTCCTATGGACAATACATTTTCAATATGGCTTTTATCAACATGCATGTGCATCACTCTCACAAGCCTTGCTCTTACCTACATGGTTGCTGCAGTCATGATCACACCAGATTCCATTTTGAACAACTATGATAATCCGTTTGCCATTGCTCTTCTTGTTTGGGTTGCCTTTGTGCTACTTGTTCATGGTGTTCACATTGTTCGCTTCTTAGTGAGGAAAATATGCCGCAAATGCCTCAAATGA 618 0.3867 MSFERLNTPKSGFRKFFQSLDEWFEYKDKGKWIEDMKGSIILAASMIATMTFSLGTNPPGGIVSVSLENVSSFESFDELCSNVTGICAGSAILGSLYTNTYVRFLVCNTICFIAAISVIFLLVSGIPMDNTFSIWLLSTCMCITLTSLALTYMVAAVMITPDSILNNYDNPFAIALLVWVAFVLLVHGVHIVRFLVRKICRKCLK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2300 205 PANTHER CASKIN 27 167 - -
Tpr5g2300 205 Pfam Domain of unknown function 31 157 IPR026961 -
Tpr5g2300 205 PANTHER - 27 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2300 Tpr-Chr5 44113740 44114544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2300 4 161 Miscellaneous Gene Families AT1G10340 22.981 7.81e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2300 - - cam:101494327 204.527