LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g2291	ATGGTCCCTGCTTCAAAAACTGAAGGTGCCACTGGAACCCACTTGTTGTCTGCTAAAGTCCGTAAAACTATTCAATCTATTAAAGAAATCGTTGGTGATCATTCTGAGGCTGATATCTATGTTGCTCTTAGGGAAACCAACATGGATCCTAATGAAACCACTCAGAAATTGCTTAACCAAGATCCTTTCCATGAGGTGAAAAGAAGGAGAGACCGAAAGAAGGAGAGTCAGAATCTTGGGAATCAGAATGTTGGGAACAGGAGTTCGGGTGAACCAAAGAGGCATTCTGACAATGCTAACAGGGGTTCAGGTGAACCAAGGAGGCATTCGGACAATGGTAACAGGGGTTCAGGTGAACCAAGGCGGCATTCGGACAGTGGTGGTGAAAGAGCGCAATTCCACAACCCATCTGAACATAATGTGGGGAACAGGGGTTCGGGTGAACCACGGAGGCATTCTGAGAATGGTGGTCAAGGATCGCAATCCCACCACCATTCCGAACATAATGTTGGGAACAAGGGTTCGGGTGAACAAAGGAAGCATTCTGAGAATGGCGGTCAGGGAGCGCAATTTCACAACACTTCTCAACATAATGTTGAGAACAAGGGTTTGGGTGAACCAAGAAGGCATCCTGAAAATGGTGGTCAAGGAATGCATTTCCACACCCCTGCTGAACATAGAGTTCGAAGAACAAACTATTCTCGAAACCCTTTACCCAGCTTCAGCAGAGAGTTCCGTGTTGTCAGAGATAACAGAGTAAACCATATATATAAAGAAGTGAAGCCCCCTTCACAACAACAGCCAATATCCACCACAGATAAATTGCCTGTAAACACTTCTGAAAAGAGTTCGTCCGCAGCTTCGACCAATCAAAAGTCAACTGGTGCTAGAAATCATCAGGCTCTAAATGGGCCTTCTGATTCTCGACAATCAAAAGATGCTGCTACAAATGCTAGACAATCAAAAGATGCTGCTACTAATGCCAGTGACAAAAAAGTTACATCTGAGAACAAGCAAGGCTTGGTATCCAATACATCATCACAGGTGCAACCAATTAAGCCTAACAACAGCCACAAGAACTCTTCAACAGTGGCTTCAACCAGTTCTGTAGTGGGAGTGTATTCTTCTTCAACAGATCCAGTTCACGTGCCGTCTCCTGATTCCAGATCATCGGGTGCTGTTGGAGCCATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGTAGACAGTCTGCTGACCTGAAACCAAAACAGTTGTTTGCTTCTAGTAGTTCTTATGCTAATAATTCTATTGTTGGAAAAGATGGTCCATCTGCAGATTCATTTCAACCAGTTGGTGCTGTCCAAAAGAATGAACAGCTCAGCCAAGCGGCTGTTAGTGCTGTAACTGAGCCCTCTTTCCCTGGCATCTCTGTTAGCAGACCATCTTTGAACAATCAGTATAATAGCAGGTCACATCAACAACTTGTGGGACATCAGAGAGTCTCCCAGCATAATAAGGAATGGAAGCCTAAATCAAGCCAGAAGACGAACAGCAATGGTCCTGGAGTGATTGGTACACCCAAAAAAAGCGTTTCATCTCCAGCTGAAAATTCTAAAGATATAGTATCAGATACAGCACAGCTTCAAGATAAACTTACACAAATGAATTTATTTGAGAACCAAAATGTGATCATAGCACAACATATTCGCGTTCCAGAGACTGATCGCCGTCGGCTAACCTTTGGTACCATTGGTGTTGGTACAGAACTTGATTCTTTGAGGCATCAATCTCAGTATCAAATAATAGGAGCTACTGATAATTTAAATGGAGAATCAACTACAAGCTTGACAGTACCTGCTTCAGAGTTGTCCTCTGATGATGTCTCTGGGAGCAAGCAGGTGGATTTACGGGATGACCAAATTAGAAGTCCCGAGTCCGAATCTCCAGCATCTGGTGCTGCTTCTGAGCAACAGTTGCCTGATAACAAAGAATCCTCAAGCTCTCATAATTTGGACAGTTATGCCAATATTGGATTGGTACGTGATACAAGTCCGTCTTATGCACCAGCATCACAACAGCAAGATTCTCATGATATGCCTGGCTTCTCGGTTTTGAACTCCCACCATGCTGCAAACAATGTTCCGACATCCACAGTCACCATGATGCAACAACAGCAGCAACAACAACAACAACATCAAGTTGCACAGATGTATCCACAAGTTCATCTTTCACATTATGCTAATCTTATGCCATATCGTCAGTTTCTCTCCCCAGTCTACGTACCACCCATGGCTGTGCCTGGATATTCAAACAGTGCTCCCTATCCTCATCCAAGTAACGGCAACAGTTACTTGTTGATGCCTGGTGGTGGTTCCCCCCATCTTAATGCCAACAACCTTAAATATGGAGTTCAGCAATTCAAGCCTGTTCCTGCTGGAAGTCCTACTGGGTTTGGAAACTTTGCTAATCCAGGGTATGCCATGTTAGCTCCAGGTGTGGTTGGGGGTGCGTCAGCTTTAGAAGATTCATCTAGAGTCAAGTACAAAGATAATCTTTATGTACCAAATCCTCAGGCGGAGACATCAGAAATATGGTTACAGAATCCAAGAGATCTTTCAGGCATGCAATCTACTCAATACTATAACATGCCAGGACAATCGCCGCATGCTACTCCATTCATGCCTTCACACACTGGACACGCTTCCTTCAATGCCGCTGCAGCTCAATCTTCTCACATGCAGTTCCCCGGTATGTATCATACTCCTCCACAACAAGCTGGCATGCCTAGTCCTCATCATTTAGGGCCGGCAATGGGAAATAATGTTGGAGTGGCCGGAGCTGCTCCTGGGCAACAAGTTGGTGCATATCAGCAACCGCAATTGGGACACCTCAATTGGCAAACAAATTTCTGA	2892	0.4474	MVPASKTEGATGTHLLSAKVRKTIQSIKEIVGDHSEADIYVALRETNMDPNETTQKLLNQDPFHEVKRRRDRKKESQNLGNQNVGNRSSGEPKRHSDNANRGSGEPRRHSDNGNRGSGEPRRHSDSGGERAQFHNPSEHNVGNRGSGEPRRHSENGGQGSQSHHHSEHNVGNKGSGEQRKHSENGGQGAQFHNTSQHNVENKGLGEPRRHPENGGQGMHFHTPAEHRVRRTNYSRNPLPSFSREFRVVRDNRVNHIYKEVKPPSQQQPISTTDKLPVNTSEKSSSAASTNQKSTGARNHQALNGPSDSRQSKDAATNARQSKDAATNASDKKVTSENKQGLVSNTSSQVQPIKPNNSHKNSSTVASTSSVVGVYSSSTDPVHVPSPDSRSSGAVGAIRREVGVVGVRRQSADLKPKQLFASSSSYANNSIVGKDGPSADSFQPVGAVQKNEQLSQAAVSAVTEPSFPGISVSRPSLNNQYNSRSHQQLVGHQRVSQHNKEWKPKSSQKTNSNGPGVIGTPKKSVSSPAENSKDIVSDTAQLQDKLTQMNLFENQNVIIAQHIRVPETDRRRLTFGTIGVGTELDSLRHQSQYQIIGATDNLNGESTTSLTVPASELSSDDVSGSKQVDLRDDQIRSPESESPASGAASEQQLPDNKESSSSHNLDSYANIGLVRDTSPSYAPASQQQDSHDMPGFSVLNSHHAANNVPTSTVTMMQQQQQQQQQHQVAQMYPQVHLSHYANLMPYRQFLSPVYVPPMAVPGYSNSAPYPHPSNGNSYLLMPGGGSPHLNANNLKYGVQQFKPVPAGSPTGFGNFANPGYAMLAPGVVGGASALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDLSGMQSTQYYNMPGQSPHATPFMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQQAGMPSPHHLGPAMGNNVGVAGAAPGQQVGAYQQPQLGHLNWQTNF*	964

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	123	-	-
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	197	698	-	-
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	697	963	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	484	531	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	606	623	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	181	201	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	505	531	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	47	396	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	638	662	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	606	662	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	260	385	-	-
	Tpr5g2291	963	Pfam	GBF-interacting protein 1 N-terminal	18	75	IPR009719	-
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	697	963	-	-
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	197	698	-	-
	Tpr5g2291	963	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	123	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	61	77	-	-
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	166	180	-	-
	Tpr5g2291	963	SUPERFAMILY	UBA-like	18	78	IPR009060	GO:0005515
	Tpr5g2291	963	MobiDBLite	consensus disorder prediction	90	129	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g2291	Tpr-Chr5	43978891	43986128	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g2291	-		-	mtr:MTR_8g019650	1503.03

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr5g2291	5	43978891	43986128	Tpr5g2291	5	43978891	43986128	ECH