Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2287 ATGGAGAAATGGAATAAACCTTCAAGAGATCATAGAAAACATCATCAAAGAGAAAACCCATCTTTCTCTTCATCTCTTTTAGATGTAATTTATCGATCGATCGACGAAGGACATCATAAAACAGAGGAAAAAGAAGAGAAACTCATGTTCTACAAAGAAATATCAACATCAACAACTACAACAACTATGAGGAAGATGAAGAATGTTGAAGATGAAAAATCAAACTTTAGAAAAACAAGAAAGGTTGAGAATTGGAATGAGAAAGTTGTGAATGGTAGAAACTCTTTGACAGAATTTGAAAGAGAAACAAGAAACAATTCAAACACACTTTCCATGCATTCTAGTTCATCATCTTCAGAATCAAGTTCAGCTGGTGGTTTTTCATCATCTGATTCAGAATCATTCTATGGTTTACAAAAACCAAAACCAATTAGAACAAGTGTTTCTGAAAAACCAAACATTCATCATGGTTATAGTAAAAACCATAACCATAACTATAACTATAACTATAACTATAACCATTCTGTTCAAACTCAAAATCCCAAAAATGAGAATGGTTTTGGTAAAACAAAGTCTAGAGCTTTGAGAATTTTGTATGGAGATATGAAGAAATCAAAGCAACCCATTTCACCTGGTGCTAGACTTGCAAGTTTTTTGAATTCACTTTTCACTTCTAGTGGAAATACAAAAAAATCAAAGGTATCATCATCAGCTACGAAAACTACTACAAATTCTGTTTTGGAAGCAAAATCAGCACAAGCTTCAACATGTTCATCAGTTTCTTCTTTTTCAAGGTCTTGTTTAAGTAAAACACCTTCATCAAGATCAGGTGCTAAAAGATCAGTGAGATTTTGTCCTGTTAGTGTTATTGTTGATGAAGATTGTAGACCTTGTGGACACAAGAATTTGCATGAAGGTGAAAAGGGTTTGATAGCTAATTCACTCTATGATGGAAAAAGTAAAAGTAGTAGTGAGGAACTGAGGTTGCATGTGATGCAAGAAAGTAGAAGAGTTGAAGAATTAGCTAGAGATTTGTTGAAGAATTATCAGAAAAAAAATGAAGTTGATTTTAATATGCAATTTGAAGATGAAGATGATGATGATGGAGCTAGTTGTTCAAGTTCTGATTTATTTGAATTGGATAATTTATCAGTAATTGGGATTGAGAGGTATAGAGAAGAATTACCTGTGTATGAAACTACTCATTTCAACCCTAATAGGGTTATTGGAAATGGTTTCATTATGTAA 1248 0.3237 MEKWNKPSRDHRKHHQRENPSFSSSLLDVIYRSIDEGHHKTEEKEEKLMFYKEISTSTTTTTMRKMKNVEDEKSNFRKTRKVENWNEKVVNGRNSLTEFERETRNNSNTLSMHSSSSSSESSSAGGFSSSDSESFYGLQKPKPIRTSVSEKPNIHHGYSKNHNHNYNYNYNYNHSVQTQNPKNENGFGKTKSRALRILYGDMKKSKQPISPGARLASFLNSLFTSSGNTKKSKVSSSATKTTTNSVLEAKSAQASTCSSVSSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNLHEGEKGLIANSLYDGKSKSSSEELRLHVMQESRRVEELARDLLKNYQKKNEVDFNMQFEDEDDDDGASCSSSDLFELDNLSVIGIERYREELPVYETTHFNPNRVIGNGFIM* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2287 415 MobiDBLite consensus disorder prediction 101 136 - -
Tpr5g2287 415 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 11 415 IPR039621 GO:0009734
Tpr5g2287 415 PANTHER PROTEIN BIG GRAIN 1-LIKE A 11 415 - -
Tpr5g2287 415 MobiDBLite consensus disorder prediction 96 138 - -
Tpr5g2287 415 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g2287 415 Coils Coil 82 102 - -
Tpr5g2287 415 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2287 Tpr-Chr5 43918380 43920177 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2287 - - gmx:100798956 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3446 2 37867656 37869260 Tpr5g2287 5 43918380 43920177 ECH
Tpr5g2287 5 43918380 43920177 Tpr5g2287 5 43918380 43920177 ECH
Tpr5g2287 5 43918380 43920177 Tpr7g0774 7 6859314 6860888 ECH