Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2280 ATGAGTTTTCTGTTCGGCCGTAGAAGGACTCCCGCAGAGCTTTTGAGGGAAAATAAAAGAATGCTAGAGAAGTCTATGAAAGAAATTGATAGGGAAAGACAAGGTTTGCAGTCTCAAGAAAAGAAATTGATTGTTGAGATTAAAAAGAGTGCCAAACAAGGACAAATGGGTGCTGTGAGGGTTATGGCCAAGGATCTTATCAGAACTCGTCATCAAATTGAAAAGTTTTACAAGCTTAAATCACAACTTCAGGGCGTTTCTTTGAGAATTCAGACGCTTAAATCTACTCAAGCGATGGGGGATGCTATGAAAGGAGTTACTAAAGCGATGGGTCAAATGAATAGGCAGATGAATTTGCCTTCTTTACAGAAGATAATGCAAGAGTTTGAAAGGCAGAATGAGAAAATGGAACTTGTTTCTGAGGTAATGGGAGATGCAATTGATGATGCTTTAGAAGGCGATGAAGAAGAGGAGGAGACGGAAGATCTTGTGAATCAGGTTCTTGATGAGATCGGAATCGATATCAACTCTAAGCTTTTGAATGCACCTGCATCTACCTCAGTCGTTGCACCAGCGGCAAAGAACAAGGTTGCTCATGCTGAACCAACAGGAAATGATGATGGGGGAATAGATGATGATCTACAGGCTAGGTTAGATAACCTGAGAAAAATGTGA 675 0.4074 MSFLFGRRRTPAELLRENKRMLEKSMKEIDRERQGLQSQEKKLIVEIKKSAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSKLLNAPASTSVVAPAAKNKVAHAEPTGNDDGGIDDDLQARLDNLRKM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2280 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 224 IPR005024 GO:0007034
Tpr5g2280 224 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 224 - -
Tpr5g2280 224 Gene3D - 6 180 - -
Tpr5g2280 224 Pfam Snf7 17 184 IPR005024 GO:0007034
Tpr5g2280 224 Coils Coil 12 46 - -
Tpr5g2280 224 Coils Coil 119 139 - -
Tpr5g2280 224 MobiDBLite consensus disorder prediction 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2280 Tpr-Chr5 43825366 43827598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2280 K12191 - oeu:111366106 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2280 5 43825366 43827598 Tpr5g2280 5 43825366 43827598 ECH