Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2263 ATGGGTTCCGGAGGAAGACCGATATTTGAATTTGACCTCAATGAGCCAGCTACAGAGGATACTGATGAGAAGGGCAGTGTTTTCTGCTTGCAGCCCCAAAAGACCCAACCATCAACAAATTCCAATGCTCCTGAATTATTTGTAGCTTCTACTGCTGCTCAAGGAATAATGAATAATCATGCATTTTCACATGCCTCAACTGTCTCGGGATTTCAACCTTTTATTCGCTCTAAATCTGGTAGTTCCCCTGGCGCTGATTCTGAGTTGAAGAAAGCTGGAGATCAGGGTCCAAAGGCTTCCTCTAAGTTCATTAAAGACGAGGATGTTAAAGTTAAGGAATCACGCATATCTGGCTTGGCAAATGCTGAATCTACTGAAAGGGAAGAAGGTGAGTGGTCTGAGGAGGAGGGTTTTGCTCATGCAAATGGCGGTAATAATCTGCCACAACCAAGTCATGCTCCGGTAGAGCAAGCAACACCTGGAATGATGGATGGAAGTGTTTCAGTTGCTTCTGACAGTAAGTCTAGCAATACCAAGAGTTCTAATTCTAATAATATAATTGATGAAAAGAGTAGCCGTGTTTCTATAGGTCTAGAATCAAATAGTAGTGAACAAAAAAACAATGGTATCCCAAATTCAGAAAGCAATATAAAAAGTGAAGCTTCTATTGATACACAGGAGGAACCCAGTTTAGTTCCCAAGCAAAAAGAGGTGAAGGGTACTGAAGCAAGTCATGCAATTAGGTGTGCAAATATTCCTGGGAAGAGGAAGATTGACCAACGAAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACCATGTTTCTTAACTTGGAAGATGTCAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGACAGACATTCACATCACCAGTTATAAGTCGGACTGTGAAGGAAGTTCGTACCGTTCCTGCACAAGTTGAACGTGTTGGAATAGCTAAGGATCAGAATCAAGCCGACTCCTCTGTCGGCGAAGGTGTAAGTCAAACTGAAACACATGAACCTAAATCTGATAGTAATGGTGATAATTCTGGACCATTTGGTAGGTCTAGGAGGATTAACAGTGAGGCAGAAACTCCTATAGAGGCCAATTTACCACCCATACCAAGACAGGGATCATGGAAACAACAGACAGATTTGAGGCAGCAGAAGAATGCATTTGTTTCTAATAGGAAGTTGGGACAGAGTGGTCAAAGCTCCAATGATGCCAGGCTGGGAAACAAGAAACATCATTCTATTAAGAAGCAAACTCCTGTCAGCTTCCAGTCCCAGGACTCATCTGTTGAACGCCTCATTCGGGAGGTAACCAGTGAAAAGTTTTGGCATCACCCAGGAGAGACCGATTTAAAGTGTGTTCCTGGAAAGTTTGAATCAGTGGAAGAGTATGTTCGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACCTGGGAAGAATCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAAGTGCTTCCAGCACATGAGTTCAAATGGTCGTTTAAGGAGGGTGATGTTGCAATTCTTTCGTCCCCTAGGCCTGGATCAGTCAGATCCAAGCAGAACAATTTAGGTCACAATGGTGGGGAATCAGAAATCACTGGACGTGTGGTGGGTACAGTTAGGCGACACATACCTATTGATACCCGTGATCCTCCTGGTGCAATACTTCATTACTATGTAGGGGATTCTTATGATCCTAGCAGGCAAGCAATCCAATTTTCCCCATTGAAGATACCAGTTAATTGTTTTGTTAATATATGTACTTTCCTGGTTCCATTGTTATACTTAGATGATATTGTTCTTTTCTTCAGGGCTGATGATGATCATATCGTAAGGAAACTTCAAACTGGAAGCATCTGGTATCTCACAGTTCTTGGTTCTCTTGCTACCACACAGAGGGAGTATATTGCTCTGCACGCATTTCGTCGCTTAAATATGCAGATGCAAAATGCAATTCTTCAGCCTAGTCCTGAGCACTTCCCAAAATACGAGCAGCATACCCCAGCAATGCCTGAATGTTTCACACCGAACTTTGTTGAGTATCTGCGAAGGACCTTCAACGAACCCCAGTTGGCAGCAATCCAGTGGGCAGCTATGCATACAGCTGCTGGTACAAGTAGTGTTGCAACAAAAAGGCAAGATCCTTGGCCTTTCACTCTTGTTCAAGGACCTCCGGGAACAGGAAAAACACATACAGTTTGGGGAATGTTGAATGTCATCCACCTTGTGCAGTATCAACACTACTACACCTCTTTGCTTAAGCATGTAGCTCCCGAAAGCTACAAGCAAGCTAATGAGCTTAATTCAGACCATGCCCCCACAGGATCTATTGATGAAGTTCTTCAAAACATGGACCAAAATCTCTTACGAACTTTGCCTAAACTAGTCCCAAAGCCTAGAATGTTGGTTTGTGCTCCTTCTAATGCTGCCACTGATGAGCTTCTTTCTCGTGTCCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGACCTGATGTAGCTCGGGTTGGGGTTGATACTCAGACACGTGCTGCCCAAGCAGTTTCTGTTGAGCGGAGAACTGAACAGCTTCTGGTCAAGACTCGGGAGGAAGTTGCAGGATGGATGCAGCAGTTAAGAAATCGTGAAGCACAGTATACTCAACAGTTGCATTGTCTGCATAGAGAACTGAATGCTACTGCTGCCGCTGTGCGCTCCCAAGGATCTGTTGGTGTTGACCCTGACCTTCTCATGGCCCGTGATCAGAATCGGGATGTTTTGCTACAGAACCTTGCATCTGTAGTGGAAGGCAGGGATAAGGTTCTGGTTGAGATGTCTCGCCTTGCTGTTTTGGAAGGTAGGTTTCGACCTGGTAGTGGTTTCAATCTGGAAGAGGCACGTGCTAGTTTGGAGGCCAGTTTTGCCAATGAAGCTGAAATAGTTTTCACAACAGTTTCTAGCAGTGGCCGTAAGTTGTTTTCTCGTCTTTCCCATGGATTTGATATGGTAGTCATTGATGAGGCTGCCCAAGCCAGCGAGGTGGGAGTTCTTCCTCCCCTTTCACTTGGGGCAGCACGATGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATCAGCAAGGCTGCAGGAACATTGATGTACAGCAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCAACAATGCTGTTGTCTGTGCAATATAGAATGCATCCCCAAATTCGGGATTTCCCTTCTAGATACTTTTATCAGGGACGCCTTAGTGACAGTGAAAGTGTGGTTAAACTGCCTGATGAAGCATACTATAAAGATCCTTTACTCAGACCTTATATATTCTATGATATCAGGCATGGGCGGGAGTCTCACAGAGGTGGTTCGGTCTCCTACCAAAACATGACTGAAGCACAATTTTGTCTCCGGTTGTATGAGCATGTTCAGAAAACTGTGAAATTTTTGGGTCTGGCAAAGATTACTGTTGGCATAATTACTCCCTACAAGCTGCAGTTGAAATGCCTCCAACGCGAGTTTGAGGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAACACAGTAGATGCTTTCCAAGGTCAAGAGCGTGATGTGATCATAATGTCTTGTGTGCGTGCATCAACTCACGGGGTTGGTTTTGTTGCTGATATACGTCGAATGAATGTTGCCCTTACGCGTGCAAGAAGGGCCCTTTGGGTGATGGGAAATGCAAATGCTCTGATACAATCCGAAGATTGGGCTGCTTTGATTGCAGATGCAAGATCTCGAAATTGCTACATGGACATGGATTCTCTTCCGAAGGATTTTCTGGTGACCAAGGGACCTGTTTACACACCATTGCCTGGTAAGGCACCTACGAATATGAGGGGAATGAGATCAGGTGGACCAAGATATAGATCAATGGAGATGCATATGGAATCCAGGGTGGGAGCACCATCTGAAGATGATGAGAGGATGAATGGAGCCTCCGTAAGCTCCAGAAATGGGAACCATCGTCCATCAAGGTATTTAACAGAGAACGCCTTAGATGATTCTGAGGGTGATAAATCCAGAGATTCCTGGCAGCATGGCATACAGAAGAGGCAGGGTTCAACCGGAACCATGGCAAAGAGAGACGTATAG 4236 0.4438 MGSGGRPIFEFDLNEPATEDTDEKGSVFCLQPQKTQPSTNSNAPELFVASTAAQGIMNNHAFSHASTVSGFQPFIRSKSGSSPGADSELKKAGDQGPKASSKFIKDEDVKVKESRISGLANAESTEREEGEWSEEEGFAHANGGNNLPQPSHAPVEQATPGMMDGSVSVASDSKSSNTKSSNSNNIIDEKSSRVSIGLESNSSEQKNNGIPNSESNIKSEASIDTQEEPSLVPKQKEVKGTEASHAIRCANIPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFTSPVISRTVKEVRTVPAQVERVGIAKDQNQADSSVGEGVSQTETHEPKSDSNGDNSGPFGRSRRINSEAETPIEANLPPIPRQGSWKQQTDLRQQKNAFVSNRKLGQSGQSSNDARLGNKKHHSIKKQTPVSFQSQDSSVERLIREVTSEKFWHHPGETDLKCVPGKFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPAHEFKWSFKEGDVAILSSPRPGSVRSKQNNLGHNGGESEITGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRQAIQFSPLKIPVNCFVNICTFLVPLLYLDDIVLFFRADDDHIVRKLQTGSIWYLTVLGSLATTQREYIALHAFRRLNMQMQNAILQPSPEHFPKYEQHTPAMPECFTPNFVEYLRRTFNEPQLAAIQWAAMHTAAGTSSVATKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQANELNSDHAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDTQTRAAQAVSVERRTEQLLVKTREEVAGWMQQLRNREAQYTQQLHCLHRELNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQNLASVVEGRDKVLVEMSRLAVLEGRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLSDSESVVKLPDEAYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNMTEAQFCLRLYEHVQKTVKFLGLAKITVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASTHGVGFVADIRRMNVALTRARRALWVMGNANALIQSEDWAALIADARSRNCYMDMDSLPKDFLVTKGPVYTPLPGKAPTNMRGMRSGGPRYRSMEMHMESRVGAPSEDDERMNGASVSSRNGNHRPSRYLTENALDDSEGDKSRDSWQHGIQKRQGSTGTMAKRDV* 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 164 229 - -
Tpr5g2263 1411 Pfam AAA domain 726 1072 IPR041677 GO:0004386
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 91 114 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 277 303 - -
Tpr5g2263 1411 CDD DEXXQc_SETX 720 1102 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 1345 1411 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 318 435 - -
Tpr5g2263 1411 Gene3D - 650 1100 IPR027417 -
Tpr5g2263 1411 Gene3D - 1101 1307 IPR027417 -
Tpr5g2263 1411 PANTHER DNA2/NAM7 HELICASE FAMILY 612 1374 IPR045055 -
Tpr5g2263 1411 PANTHER DNA2/NAM7 HELICASE FAMILY 1 592 IPR045055 -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 325 340 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 380 413 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 78 244 - -
Tpr5g2263 1411 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 612 1374 - -
Tpr5g2263 1411 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 592 - -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 1375 1394 - -
Tpr5g2263 1411 CDD SF1_C_Upf1 1103 1292 IPR041679 -
Tpr5g2263 1411 MobiDBLite consensus disorder prediction 289 303 - -
Tpr5g2263 1411 Coils Coil 905 925 - -
Tpr5g2263 1411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 719 1304 IPR027417 -
Tpr5g2263 1411 Pfam AAA domain 1079 1275 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2263 Tpr-Chr5 43674626 43682779 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2263 - K10706 gmx:100794516 2276.9