Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2222 ATGGCTCTAACAAATGAAATCATGGGTTCATCATTTATACAAAGATCATTATTTCCTTCTTCATCACAAATTTTTCAACAGAAAAATGGAAGATTTTTAATCAGTCCTGTTTTTGTTCCTTTTGGAAACAAAAAAGTTTTGAAATTAAGAAAATCTGCTATGTTTCCTGTTGCAGCTATAAGTGAAGATTTGATGAAAGGCTCTTCATCTTCTTCATCTTCATCTTCATCTTCTTCTTCTGTTCCTTCTGAGAAACCAGTGAAATTCAAAGTTAGAGCTGTTGTTACAGTGAGGAACAAGATCAAAGAAGATTTCAAAGAGACTTTTGTGAAACATCTTGATTCTTTGACTGATAGAATTGGAAGAAATGTTGTTCTTGAACTTTTTAGTACTGAGATTGATCCAAAAACAAAAGGCCCAAAGAAGAGTAATGAAGCTGTGCTTAAGGATTGGTCAAAGAAGACTAATGTTAAGGCAGAGAGAGTTAGTTACACAGCTGAATTTACAGTTGATTCAAATTTTGGAGAACCAGGTGCTATTACTATGATAAATAATCATCAACAAGAATTTTTTTTGGAAAGTATAACCATTGAAGGTTTTGCTACTGGAGCATTTCATTTTCCTTGCAATTCTTGGGTTCAAGCTAGAAAAGATCTTCCTGGAAAAAGAATTTTCTTTTCTAATAAGGCTTATTTACCCGATGATACACCTGCTGGGATTAAAATTTTGAGGGAGAAAGATTTGAAAAATCTTAGAGGTGATGGAAGAGGAGTTAGAAAATTATCTGATAGAATTTATGATTATGATATATACAATGATTTGGGAAATCCAGATAAAGGACTTGATCTTGTTAGACCAACTCTTGGAGCTTCTAAAATGTATCCATACCCAAGACGGTGTCGTACTGGCCGTGGACCAAGTGATACAGATATTACTTGTGAGAGTAGAATAGAGAAGCCACTTCCTATGTATATACCAAGAGATGAAAGATTTGAGGAATCTAAAAAGAACACATTTTCAGTGAAGAGGCTTAAAGGAGTGCTACATAACTTGCTCCCTGGCCTTAAATCAAGTCTTTCTGCTCACAATCAAGACTTCAATGAATTCTCAGATGTTGATGGCCTTTATAGTGTAGGGCTACTCATTAAGTTGGGTTTGCAAGATGATGTTTTGAAGAAACTCCCATTGCCTAAAATTGTTAGCAAGATTCAAGAATCCAGCCAGGGTATTCTTAAGTATGACATTCCCAAGATTATATCAAAGGACAAATTTGCTTGGTTGAGAGATGATGAATTTGCACGTCAAGCAATAGCTGGAGTTAATCCTGTTACCATTGAGAGGCTTACAGTTTTTCCACCAGTTAGTAAATTAGATCCTGAAATTTATGGTTCACAAGAGTCTGCCCTTAAAGAAGAACACATTGTACATCAACTTAATGGCATGACTGTCCAAGAGGCAATAGATGAAAATAAGCTGTATATAATTGATTATCATGACATCTATCTTCCATTTTTGGAAAGGATCAATGCTTTGGATGGTAGAAAATCATATGCAACAAGAACCATATATTTCTTGACACCACTTGGTACTCTAAAGCCAGTTGCTATAGAACTTAGCTTACCTCCATCTGGACCAAACACCCCATCAAAACGTGTAGTTACACCTGCTTTAGATGCAACTACTAATTGGACTTGGATGCTTGCAAAAGCTCATGTTTGCTCCAATGATGCTGGTGTGCACCAACTTGCTCACCATTGGCTACGCACACATGCTTCCATGGAACCATTTATATTGTCTGCTCATAGGCAATTAAGTGCAATGCATCCAATTTTCAAGTTATTGGATCCACACATGAGGTACACTTTGGAGATCAATGCTTTAGCTCGCCAGAGCTTGATCAATGCAGACGGTGTCATCGAGTCTTGCTTCACTCCTGGTCGCTATGCAATGGAGATTAGTTCAGCTGCTTACAAAACCTCTTGGCGTTTTGACAAAGAAAGCCTCCCTCAAGATCTCATCCGCAGGGGAATGGCTGTTCCTGATCAAACGCAACCACATGGCCTAAAGCTAACAATGAAAGATTACCCTTATGCAGAAGATGGTCTTCTAATTTGGTCAGCAATCGAAAATTGGGTCCAAAAATATGTGAGCTATTATTATCCAAATCCAAGCCTAATAATCAATGATAGAGAGTTACAAGCTTGGTACTCGGAATCAATCAATGTAGGCCATGCTGATTTAAAGGACGAAACATGGTGGCCGAAATTGTATGACAGTGACAATCTTGTCTCGGTGCTAACAATCTTAATTTGGAATGCATCCGCGCAACATGCCGCACTTAATTTCGGTCAGTATCCTTATGGAGGGTATGTGCCAAATCGTCCACCGTTGATGAGAAGGTTGATACCTGAAGAAAGTGATCCTGAATATGCAAGTTTCATATCTGATCCACAAAAGTATTTCCTCAATGCATTGCCTAGTTTGTTGCAAGCTTCAAAATATATGGCTGTTGTTGATACTCTTTCCACTCATTCGGCTGACGAAGAGTATTTAGGTGAGAGGCAACATCCTTCGACTTGGAACGGTGATGCTGAGATTGTCGAAGCTTTTCATGAATTTTCTGCTGAAATTGGAAAGATTGAGAAGGTGATTGATAGTAGGAACAGTGATAGGAATTTGAGGAACCGTTGTGGTGCTGGTGTTTTGCCTTATGAATTGCTTGCTCCTAGTTCTGAACCTGGTGTTACATGCAGAGGGGTTCCAAATAGTGTGTCCGTATAA 2781 0.3808 MALTNEIMGSSFIQRSLFPSSSQIFQQKNGRFLISPVFVPFGNKKVLKLRKSAMFPVAAISEDLMKGSSSSSSSSSSSSSVPSEKPVKFKVRAVVTVRNKIKEDFKETFVKHLDSLTDRIGRNVVLELFSTEIDPKTKGPKKSNEAVLKDWSKKTNVKAERVSYTAEFTVDSNFGEPGAITMINNHQQEFFLESITIEGFATGAFHFPCNSWVQARKDLPGKRIFFSNKAYLPDDTPAGIKILREKDLKNLRGDGRGVRKLSDRIYDYDIYNDLGNPDKGLDLVRPTLGASKMYPYPRRCRTGRGPSDTDITCESRIEKPLPMYIPRDERFEESKKNTFSVKRLKGVLHNLLPGLKSSLSAHNQDFNEFSDVDGLYSVGLLIKLGLQDDVLKKLPLPKIVSKIQESSQGILKYDIPKIISKDKFAWLRDDEFARQAIAGVNPVTIERLTVFPPVSKLDPEIYGSQESALKEEHIVHQLNGMTVQEAIDENKLYIIDYHDIYLPFLERINALDGRKSYATRTIYFLTPLGTLKPVAIELSLPPSGPNTPSKRVVTPALDATTNWTWMLAKAHVCSNDAGVHQLAHHWLRTHASMEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGVIESCFTPGRYAMEISSAAYKTSWRFDKESLPQDLIRRGMAVPDQTQPHGLKLTMKDYPYAEDGLLIWSAIENWVQKYVSYYYPNPSLIINDRELQAWYSESINVGHADLKDETWWPKLYDSDNLVSVLTILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEESDPEYASFISDPQKYFLNALPSLLQASKYMAVVDTLSTHSADEEYLGERQHPSTWNGDAEIVEAFHEFSAEIGKIEKVIDSRNSDRNLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSV* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2222 926 ProSitePatterns Lipoxygenases iron-binding region signature 2. 607 617 IPR020834 GO:0016702|GO:0046872
Tpr5g2222 926 Gene3D - 559 925 - -
Tpr5g2222 926 SUPERFAMILY Lipoxigenase 233 926 IPR036226 -
Tpr5g2222 926 CDD PLAT_LH2 89 228 IPR042057 -
Tpr5g2222 926 ProSitePatterns Lipoxygenases iron-binding region signature 1. 580 594 IPR020833 GO:0016702|GO:0046872
Tpr5g2222 926 Gene3D - 232 334 - -
Tpr5g2222 926 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 89 231 IPR036392 GO:0005515
Tpr5g2222 926 Pfam Lipoxygenase 240 909 IPR013819 GO:0016702|GO:0046872
Tpr5g2222 926 Pfam PLAT/LH2 domain 141 226 IPR001024 GO:0005515
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 197 215 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 223 244 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 262 278 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 295 314 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 363 384 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 411 427 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 450 469 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 517 541 IPR001246 GO:0016491
Tpr5g2222 926 PRINTS Plant lipoxygenase signature 838 852 IPR001246 GO:0016491
Tpr5g2222 926 Gene3D - 424 557 - -
Tpr5g2222 926 ProSiteProfiles PLAT domain profile. 105 227 IPR001024 GO:0005515
Tpr5g2222 926 SMART LH2_4 89 228 IPR001024 GO:0005515
Tpr5g2222 926 PANTHER LIPOXYGENASE 42 924 IPR000907 GO:0016702|GO:0046872
Tpr5g2222 926 Gene3D PLAT/LH2 domain 77 231 - -
Tpr5g2222 926 PRINTS Lipoxygenase signature 562 579 IPR013819 GO:0016702|GO:0046872
Tpr5g2222 926 PRINTS Lipoxygenase signature 580 597 IPR013819 GO:0016702|GO:0046872
Tpr5g2222 926 PRINTS Lipoxygenase signature 600 620 IPR013819 GO:0016702|GO:0046872
Tpr5g2222 926 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 230 926 IPR013819 GO:0016702|GO:0046872
Tpr5g2222 926 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 42 924 - -
Tpr5g2222 926 Gene3D - 335 423 IPR027433 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2222 Tpr-Chr5 43220701 43228912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2222 1 926 Acyl Lipid Metabolism Gene Families AT1G17420 70.151 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2222 K00454 - gmx:100791000 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2222 5 43220701 43228912 Tpr5g2222 5 43220701 43228912 ECH