Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2200 ATGTCTTGGGCTGGTTCTGAAGATATCTACCTTTCTACTTCACTTGCTAGTTATCTTGACACTAATGCTGTTCTTGAGGGTGCATGTGAGAGGGTTATTGTTGGTGATCTATATTGCGACATTCCTCTAGGTCTTTATGTAATCCGTGGAGAAAATGTTGTTCTAATCGGTGAGATGGACTTAGAGAGGGAGGAACTTCCCCCACATATAACTCGTGTTCCTACGGAAGAAATCAGGAAGGCACAAAAAGTAGAAAGGGATGCTTCAGAACTGAAAGGGACTATGAGAAAAAGAATGGAGTTCCTTGACTTGGACTAG 318 0.4214 MSWAGSEDIYLSTSLASYLDTNAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEMDLEREELPPHITRVPTEEIRKAQKVERDASELKGTMRKRMEFLDLD* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2200 105 Gene3D - 19 103 - -
Tpr5g2200 105 PANTHER LSM1 22 104 IPR044642 -
Tpr5g2200 105 SUPERFAMILY Sm-like ribonucleoproteins 21 60 IPR010920 -
Tpr5g2200 105 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1 22 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2200 Tpr-Chr5 42942748 42947582 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2200 K12620 - rcu:8279030 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2200 5 42942748 42947582 Tpr5g2200 5 42942748 42947582 ECH