Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2199 ATGTCTTCTGTCACTGTCACTGCCCTTACAATTCTGTTACTGATGATATCTCTGCACACAGAAGCTTCCGTTCATGATTACAAAGGTGAATCTTTCTCTGCCAAAGGTAACGCCTTTGTCTTCCATGGAGGTAGCGAAGGAATTTACTCATCTACCCTCAATGACACTTCCTTCTCACCTTCAATTGCCGACTCTTTCATAAGGTTTGATAAAGTCACATTCCGAAGAAACAAGGAATTATCAAACTTTAGCTCGTGGCCGGTTCAAGCTGTTGTTTTTGAAGTTGAAGATAGAGAGACGATCGGTGGTTCGGCCTACGGGGGTCAAAGGGCTGTCTGTTGCACCGGTGATCTGGCAAAACTCGGAGTGTGCAATGAAGGACAGGTCATTCACCGTCGTTCTACAGTCAACACGGACTGGCCTCAAGTTTACGGCGTCACTTTTAACTTAGATGATGAAGTAGCAGAGCTGCCGTTGAAATCGATACAAATCACAAAAACCGGAATGTATAATTTGTATTTCATCCATTGTGATCCAAGGCTTAAGGAATTGGTTGTTGAAGGGAAAACTGTATGGAAGAATCCGTCCGGTTATCTTCCCGGTAGAATGGCACCTATGAAAATTTTCTTCCAGTTCATGTCTTTTGCATATGTGTTGCTTGGAATCTTTTGGTTCTTTCAATATCTTAGATTTTGGAAGGAAGTATTTCCATTGCAGAACTGCATAACACTAGTGATAACACTAGGCATGTTTGAGATGGCTTTTTGGTACTTTGACTATGCTGAATTTAGCGAAACAGGAATCAGGCCAACCGGGACGACTGTATGGGCAGTCACCTTCGGGACAGTTAAGAGAACTGTCGCACGGTTGATCATTCTAATCGTTTCGATGGGATACGGTGTTGTGAGACCTACCCTTGGAGGCCTTACATCAAAGGTTGTTTTGCTTGGTGGAACATTCTTTGTTGCATCTGAAGTGCTTGAATTGGTTGAACATGTCGGTGCAGTAAGCGATCTTTCTGGAAAGGCAAAACTTTTCTTGGTTCTTCCCGCTGCAGTATTAGACGTTTTCTTCATTCTTTGGATCTTTACTTCACTATCTGCAACTTTAAATAAGCTTCAGACCAGAAGGATGATGATCAAATTGGATATGTATAGAAAGTTCACCAATGCTTTGGCAGTAGCTGTGGTTGTATCTGTGGGATGGATATGCTATGAGCTGTATTTCAAATCAAATGATATATACAATGAGCAATGGCAAAATGCTTGGATCATCCCAGCCTTTTGGCAAGTTCTGTCTTACTCTCTCCTTTGTGTCATCTGTGTTGTCTGGGCACCATCTCAAAATTCAACACGATATGCTTACCGCGAAGATGGGAGTGAAGAGTTCGATAGAGACGATACTACTTTGACACTCATAAAACCATCATCTATTTTACCAAAGGATGTAAGAAGTGTGACAGATGCTAGACCAGTACAAACCAGCAATGAAAATTCAAATGATGATTTAGAAGAAGATAAAAGAGAATAA 1530 0.415 MSSVTVTALTILLLMISLHTEASVHDYKGESFSAKGNAFVFHGGSEGIYSSTLNDTSFSPSIADSFIRFDKVTFRRNKELSNFSSWPVQAVVFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCNEGQVIHRRSTVNTDWPQVYGVTFNLDDEVAELPLKSIQITKTGMYNLYFIHCDPRLKELVVEGKTVWKNPSGYLPGRMAPMKIFFQFMSFAYVLLGIFWFFQYLRFWKEVFPLQNCITLVITLGMFEMAFWYFDYAEFSETGIRPTGTTVWAVTFGTVKRTVARLIILIVSMGYGVVRPTLGGLTSKVVLLGGTFFVASEVLELVEHVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLNKLQTRRMMIKLDMYRKFTNALAVAVVVSVGWICYELYFKSNDIYNEQWQNAWIIPAFWQVLSYSLLCVICVVWAPSQNSTRYAYREDGSEEFDRDDTTLTLIKPSSILPKDVRSVTDARPVQTSNENSNDDLEEDKRE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2199 509 MobiDBLite consensus disorder prediction 482 509 - -
Tpr5g2199 509 Pfam Lung seven transmembrane receptor 164 450 IPR009637 GO:0016021
Tpr5g2199 509 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 9 509 - -
Tpr5g2199 509 Coils Coil 509 509 - -
Tpr5g2199 509 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 9 509 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2199 Tpr-Chr5 42936497 42939899 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2199 - - gmx:100806912 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2199 5 42936497 42939899 Tpr5g2199 5 42936497 42939899 ECH