Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2191 ATGGACGACGAAATGGCAATGGATTCTCCTTTCTTCGATCCTCAAGACCTCACCACTCGACAGAAGCTCCGCAGATACGGGAAGTGGCATTTAAATTCAGGTGCCTCAGTCGAGCAAGATTACTCGGCTTCTAAGTTAAGTGAAAGTGGGCTGTTTTATGATGGACAAAACATCCATAGTCCTACTAATCCCGCACTTATTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGACACTGATTACTTGGAAGATAAGTCTTTGTATTCCTCTAGAAAGAGGTTATCTGCTGATATTCCTGGAGTTCCTGGCATGGATGATGGTTTTGACTCTGTACGATATTCATTAAAGGCTTGTAAGCAAGAAGGTGACTCATTGGGAGATGATGCAGACAATATATTTAATCTGTTTGCTTCTCTATTTGATTCCTCTTTGACTGGAATGATGCCTATTCCTGATCTGATACTAAGATTTGAAAATGAGTGTCGAAATGTTTCAGAGTCTATCAGGTATGGTTTGAACATAAGGCATCGAGTTGTTGAGGACAAATTAATGAGGCAGAAGGCTCAGCTCCTGCTTGATGAGGCGGCAACATGGTCTCTCTTGTGGTTCCTTTATGGGAAAGTGATGGAAGAGCTCTCCAAAGAGAAAATACTGGTGAAAGAAACATCACATGTAGTGGCTTGTGAGTTTGTTGTGGAGGACCATATAGCTCAATTGTGCCTTAGGGTAGTCCAGTGGTTAGAAGGTTTAGCTTCCAAAGCACTTGACTTGGAGGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCAAGCAGTGGTGTTTGGCATCATACTCAACGTTACCTAAAGAAAGGAACTTCTGATAGAAACCTTGTTCATCACCTGGACTTTGATGCTCCAACTCGCGAAAATGCAAATGTTTTGCCCGATGACAAAAAACAAGATGAATCTCTTCTAGAGGATGTATGGACTCTTCTAAGGGCTGGAAGGCTAGAAGAGGCGTGTGGACTTTGCCGATCTGCTGGACAGCCATGGAGAGCTTCCACTCTGTCTCCTTTTGGAGGTTTGAACCTGTTCCCTTCTGTTGAAGCTCTGATGAAGAATGGCAAAAATAGGACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCCTATTGCGCATCAGAGAAAATAGCAGAGCTAGGTGGGAAATATGAAGCAGCTGTGTATGCAGCTCAATGCAGCAACCTCAAACGGATGCTTCCGCTCTGCACAGACTGGGAGTCAGCATGCTGGGCAATGGCAAGATCTTGGCTAGATGTGCAGGTAGACTTGGAAGTCACTCGTTCACTGCCAGGAGGAGTTGATCAAAATAGAAATTTTGGAGATGTAATTGACCGAAGTCCTGGACAAGTTGATGGTTCCTTTGATCCTTCAAGTGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAACAACCACGACAACTTTCATCTCTTCTGCAAAAACTTCATTCAGGGGAAATGATCCATGAAACTGTTACGCGGCAATGCAAGGATCAACAACGACAAATTCAGATGAGCTTAATGCTAGCAGACATACCACATGTATTAGACCTTATATGGTCATGGATAGCACCCTTGGAAGACGATCAGAATGTATTTAGGCCTCACGGAGATCCTCAGATGATACGATTTGGTGCACATCTAGTCCTTGTGCTTAGATATTTACTTCGCGAGGAAATGGAGGCTGCTTTCAGGGACAAGATTCTGAGCGTTGGTGATAATATTTTACACCTGTATGCCCAATTTCTGTTTTCAAAGGAGCATGAGGAGTTGGTAGGCATATATGCTTCTCAGCTTTCTCGTCACCGTTGCATAGACCTCTTTGTTCACATGATGGAACTTAGGCTGCACAGCAGCGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTGCCATTTTCTTCGGTGGACGAATCAAAGGGTAGTTTTGAAGAGATTATTGAGAGAGTTTTGTTGAGATCTCGAGAGGTCAAGATTGGCAAATATGACAACCTCTCAGATGTTGCAGAACAGCACAGACTGCAGAGTCTTGAAAAAGCTAAAGTCATCCAGTGGCTTTGCTTCACACCACCATCAACCATTACTAATGTGAAAGATGTTAGTAAAAAACTTCTTCTTCAAGCATTGGAACATAGCAATGTGCTCTTCAGGGAGTTTGCCTTGATTTCTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCACACAGCTCTTGGTTTTCTTGCTGAGCCCTTGAAACAACTTGCAGAGACTCTTGAGACCTCCGAGCATCATAATGTTTTTGAGGATCTGAGAGAGGTTGAAGAATGGCGCGAGTATTACTCCTGTGATGCAACCTACCGCAAATGGCTTAAAATTGAATTGGAGAATGCAGAAGTTCTTGTCTCTGAATTGTCACTAGAGGAAAAGGAAAGGGCTATTTCAGCAGCTAAGGAAACACTGACTGCGTCTCTTTCACTGCTAGAAAGAAGAGAAACACAGTGGCTCGCTTCTACTGATAATATATATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACTGCGATGCTCTGCCTGCCATCTGGAGATTGTTTGTGTCCAGATGCTACTGTATGCACCACACTGATGAGTGCCCTCTACTCTTCTGTTGGTGACGAGGTTGTCTCAAATCGACAGCTAATGGTGAAAGTCTCTATATCTTCGAGGGACAATTATTGCATTGATATTGTTCTTCGTTGCTTAGCAATATTTGGTGATGGATTTGGACCACATGATATCAATGACGGTGGCATTCTTAGCACCATTTTGGCTGCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAGGCTGGAGTTACAATGGAAATATCCCGATTGGATGCTTGGTATTCCAATAAAGATGGCATCCTAGAGTTTCCTGCAACATACATTGTGAAAGGACTTTGTCGCAGGTGCTGTCTCCCAGAAGTCATTCTTCGTTGCATGCAAGTTTCTGTTTCTCTTATGGGATCAGGAGTCCAGCCAGATTCCCACGATAGCTTGATTGAACTGGTCGGCAGTCCTGAAACTCGCTTTCTTGACTTGTTCAGTCAACAACAATTACAGGAGTTTTTATTGATGGAGAGGGAATACTCAATCTGCAAAATGGAGCATACACAGGAATGA 3237 0.431 MDDEMAMDSPFFDPQDLTTRQKLRRYGKWHLNSGASVEQDYSASKLSESGLFYDGQNIHSPTNPALILENIKQEVESLDTDYLEDKSLYSSRKRLSADIPGVPGMDDGFDSVRYSLKACKQEGDSLGDDADNIFNLFASLFDSSLTGMMPIPDLILRFENECRNVSESIRYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKVMEELSKEKILVKETSHVVACEFVVEDHIAQLCLRVVQWLEGLASKALDLEAKVRGSHVGSYLPSSGVWHHTQRYLKKGTSDRNLVHHLDFDAPTRENANVLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASTLSPFGGLNLFPSVEALMKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAELGGKYEAAVYAAQCSNLKRMLPLCTDWESACWAMARSWLDVQVDLEVTRSLPGGVDQNRNFGDVIDRSPGQVDGSFDPSSGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHETVTRQCKDQQRQIQMSLMLADIPHVLDLIWSWIAPLEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLREEMEAAFRDKILSVGDNILHLYAQFLFSKEHEELVGIYASQLSRHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSVDESKGSFEEIIERVLLRSREVKIGKYDNLSDVAEQHRLQSLEKAKVIQWLCFTPPSTITNVKDVSKKLLLQALEHSNVLFREFALISMWRVPAMPIGAHTALGFLAEPLKQLAETLETSEHHNVFEDLREVEEWREYYSCDATYRKWLKIELENAEVLVSELSLEEKERAISAAKETLTASLSLLERRETQWLASTDNIYESAEPVFLELHATAMLCLPSGDCLCPDATVCTTLMSALYSSVGDEVVSNRQLMVKVSISSRDNYCIDIVLRCLAIFGDGFGPHDINDGGILSTILAAGFKGELPRFQAGVTMEISRLDAWYSNKDGILEFPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVQPDSHDSLIELVGSPETRFLDLFSQQQLQEFLLMEREYSICKMEHTQE* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2191 1078 Gene3D - 277 426 - -
Tpr5g2191 1078 Pfam Nuclear pore protein 84 / 107 192 867 IPR007252 GO:0005643|GO:0017056
Tpr5g2191 1078 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 1075 - -
Tpr5g2191 1078 Gene3D - 1004 1078 - -
Tpr5g2191 1078 Gene3D - 698 899 - -
Tpr5g2191 1078 PANTHER NUP107-RELATED 4 1075 IPR007252 GO:0005643|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2191 K14301 - gmx:100786552 1851.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2191 5 42826420 42846128 Tpr5g2191 5 42826420 42846128 ECH