Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2164 ATGAGTTTGTTTGACATGGATTTGAGTGGTGTAGTAAACAATTTGTTCAACCATGTTCATGAAACTTCTTCTAGGAATCATGAGAATCATGAAAGTAGAAGAGCTTCTAATATCCCAGTTGACATTTTGGATACTCCTAAGGAGTACATGTTTTTCATGGATGTTCCTGGCCTCTCCAAGTCCGAAATTCAGGTGACAGTTGAAGATGAGAACACACTTGTGATAAAGAGCAATGGAAAAAGGAAACGACAAGATGGTGAAGATGAAGGATGCAAGTACCTTAGGCTGGAGAGAAGAGCACCTCAGAAATTGTTGAGGAAGTTCCGTTTACCGGAGAATGCTAATGTGTCAGCAATCACAGCTAAATGTGAGAATGGTGTTCTGACTGTGGCTGTAGAGAAGCATACTCCACCTCCAAAATCAAAAACAGTTGAAGTTGCAATTGCCTAA 450 0.4022 MSLFDMDLSGVVNNLFNHVHETSSRNHENHESRRASNIPVDILDTPKEYMFFMDVPGLSKSEIQVTVEDENTLVIKSNGKRKRQDGEDEGCKYLRLERRAPQKLLRKFRLPENANVSAITAKCENGVLTVAVEKHTPPPKSKTVEVAIA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2164 149 CDD ACD_sHsps-like 41 134 - -
Tpr5g2164 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 19 149 - -
Tpr5g2164 149 Gene3D - 3 148 IPR008978 -
Tpr5g2164 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 149 IPR002068 -
Tpr5g2164 149 SUPERFAMILY HSP20-like chaperones 27 141 IPR008978 -
Tpr5g2164 149 Pfam Hsp20/alpha crystallin family 41 146 IPR002068 -
Tpr5g2164 149 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 19 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2164 Tpr-Chr5 42417295 42418264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2164 K13993 - gmx:100803161 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2164 5 42417295 42418264 Tpr5g2164 5 42417295 42418264 ECH