Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2152 ATGGCAAAATCCAATTCCGACAAACCCTCAAAAAACGTAGAAGACATCAACCTCCTCCAATCCGAGGTAGCTTCTTTCGCTTCTTCTCTTGGTTTATCCACTTCCCAACCCAATTCAGGTTTCAACGATGTCGATTTTCGCAAAACCAAACCAAAGAAAACACCTGAAAAAACCACATCCCAGAATACCCAGAAGCCAAAAAACAAAACTTTTAGCAAAAACAATGAACCCCATGAAAAACCCAAATCAAAACCTGAGCCAAAACCAAAACCCAACTCAAAACCCGAACCAAAACCCAAACCTCCTGTATTGTCATTGAATGATGCTAATAAGGATAAAGGGTATAACAAGTTTAAGAATCTTCCAAAGCTTCCTTTGATTAAGGCAAATGCTTTAGGTGTGTGGTTTGAGGATGCTGCTGAGCTTGAAGGGAAGGTGATTGGGGAAGGGAAGAAGGTGGAGATGAAGAATTTGGATGAGTGGAAGAGGTTTGTGGAGAAAAAGAGGGAATTGGGTGAGAGATTGATGGCACAATTAGCTCAGGATTATGAATCAACTAGAGGAAAAAGTGGTGATATTAAGATGTTGATTTCTACTCAGAGGTCTGGTACTGCTGCTGATAAAGTGTCTGCTTTTTCGGTTTTGGTTGGTGATAATCCTGTTGCAAATTTGAGGTCTCTTGATGCTCTTTTGGGAATGGTGACTTCCAAGGTTGGAAAGCGCCATGCCTTGTCAGGTTTTGAAGCACTTCAAGAATTATTTATTGCAAGCTTATTACCAGATCGTAAATTGAAGACCCTGATGCAAAGGCCGCTAAATCACATTCCTGAAAATAAAGATGGCAACTCCCTTCTACTTTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAACGATTTATTGTTGCACTTGAAGAAGCATCCCGTGACATGCTACCTGCTTTGAAAAACAAGTCATTAAAGACCATATTTGTGCTACTGAGTAGGAAGTCGGAGCAAGAGCGCAAACTACTTACTGCACTTGTTAATAAACTCGGGGATCCAGATAATAAGGCAGCATCTAATGCTGACTATCACTTGACCAACCTTTTGTCTCAACACCCAAATATGAAGGCTGTGGTTGTTAATGAGGTGGATACTTTTCTCTTTCGGCCTCATTTATCACCGCGTTCACAGTACCATGCGGTTAACTTCTTGAGTCAAATCCGTCTCACCAATAAAGGAGATGGCCCGAAAGTGGCGAAACGCCTCATTGATGTATATTTTGGACTGTTTAAGGTTTTGATAACTGGCCCAAGCAGCAATGAGAAGTTCGATAAACACAGAAAAGAAAATCCTAAAGAGAAAAATTCAGATGGGCATTCAGATTCACACGCGGAAATGGACTCCAGGCTTCTATCAGTTCTCTTAACGGGAGTGAATAGAGCATTTCCTTTTGTCTCAAGTAATGAAGCCGATGACATTATTGAAGTTCAAACACCAGTACTTTTCCAATTGGTTCATTCAAAAAATTTTAATGTCGGAGTTCAAGCACTGATGCTTCTTGATAAAATTTCATCCAAGAATCAGATAGCCAGTGATCGATTTTACCGTGCTTTGTACTCCAAACTCCTTCTTCCAGCTGCCATGTATACATCCAAGGCAGAAATGTTTATTGCACTTATTCTAAGAGCAATGAAAAGGGATGTTAATTTAAAGCGAGTAGCTGCATTTTCTAAACGTCTACTACAGATTGCACTCCAGCAGCCACCACAATATGCCTGTGCATGCCTTTTCCTTCTTTCTGAACTCTTTAAAGCCAGACCACCTTTATGGAACATGGCGTTGCAGAACGAGTCTCTCGATGACGAACTTGAACACTTTGAAGATGTTATAGAAGAAACTGATAAGGAACCTGTAACCGTATCAGATAAGGAACCTGCAACTGTGTCCGATAAACCAAGTGATGATATTGTACCAGCTCAGAATGGTGAGGTTGCCAATTCTGACAAAGATTCTTCTGACGGTGAAGATGATGATGTTGATCAACCAGCATCTTCTGAAGAAGATGATGATGATAATGATGATGATGATGATGATCAACCAGCATCTTCTGAAGATGATGATGATTTCGATGATGCCTTGGAGGATGAAGATTTTTCACTTGCAAAGAGTAAAAAGAATCATAAAAAATCAAAAAAATCAAATTCTGAAACTGATAATGAAGGTCAGAAATCGCAGGAATCTATCAAGAAGCCTTTGTTGCCTGGAGGTTATGATCCACGTCACCGAGAGCCGTCTTATTGCAATGCAGACCGTGTAAGTTGGTGGGAGTTACTGGTGCTTGCTTCACATGCACACCCTTCTGTTGCCACCATGGCAAGAACTCTTCTTTCTGGAGCCAACATCGTCTATAATGGAAACCCGTTAAACGACCTCTCTTTAACAGCTTTCTTAGACAAATTCATGGAGAAAAAACCAAAACAAAGCGCTTGGCATGGTGGTTCTCAGATTGAACCTGTCAAGCAGCTGGATGTTAACAACCTCTTGATTGGGCCAGAGATTCTTGCACTAGCTGAAGCAGATGTACCACCAGAGGATCTAGTCTTCCATAAATTCTATACAAACAAGAAGAGTTCATCTTCAAAACCAAAGAAAAAGAAGAAGAAACCAACTGATGAAGATGATGTTGATGATTATTTTGGTGATGATATTGATGGTGAAGATGAAAGTGATAATGAAGAGATTGAGGATCTCTTGGATTCTGCTGATCCCTCATTAGGACCAGATGGTGATTTTGATTATGATGATTTGGATAAAGTAGCCAATGAGGATGATGATGACTTGATTGGTGATGATGTTAGCGATGCAGACATAGATATAGATATACCCTCAGATATAGAATTGGATGATGCTGATGATACTCCATTTGCTGATGATGGCAGTGATGATGATAATGATATTGAGATAGGTGATGTTGATGATGCCACTGATGATGAGGAGGAGGAGGAGGATCAAGTTGACAAAAGAAAAATAAAACGTAAAACTGGTGGCAAAAAGGGTGCTTCTCCATTTGCAAGTTATGAAGAGTTTGAGCATATGCTAGAAGATGATGATCTAACTGAGAAAAAACCTTCTAAGGATAAAAACAAATCCAAAAGAAAAAAGATGGAAGATGATTCTACTGAGAAAAAACCTTCCAAGGATAAAAACAAATCCAAGAAAAGGAAAAAGAAGTTTGCTCAATGA 3231 0.3977 MAKSNSDKPSKNVEDINLLQSEVASFASSLGLSTSQPNSGFNDVDFRKTKPKKTPEKTTSQNTQKPKNKTFSKNNEPHEKPKSKPEPKPKPNSKPEPKPKPPVLSLNDANKDKGYNKFKNLPKLPLIKANALGVWFEDAAELEGKVIGEGKKVEMKNLDEWKRFVEKKRELGERLMAQLAQDYESTRGKSGDIKMLISTQRSGTAADKVSAFSVLVGDNPVANLRSLDALLGMVTSKVGKRHALSGFEALQELFIASLLPDRKLKTLMQRPLNHIPENKDGNSLLLFWYWEECLKQRYERFIVALEEASRDMLPALKNKSLKTIFVLLSRKSEQERKLLTALVNKLGDPDNKAASNADYHLTNLLSQHPNMKAVVVNEVDTFLFRPHLSPRSQYHAVNFLSQIRLTNKGDGPKVAKRLIDVYFGLFKVLITGPSSNEKFDKHRKENPKEKNSDGHSDSHAEMDSRLLSVLLTGVNRAFPFVSSNEADDIIEVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRFYRALYSKLLLPAAMYTSKAEMFIALILRAMKRDVNLKRVAAFSKRLLQIALQQPPQYACACLFLLSELFKARPPLWNMALQNESLDDELEHFEDVIEETDKEPVTVSDKEPATVSDKPSDDIVPAQNGEVANSDKDSSDGEDDDVDQPASSEEDDDDNDDDDDDQPASSEDDDDFDDALEDEDFSLAKSKKNHKKSKKSNSETDNEGQKSQESIKKPLLPGGYDPRHREPSYCNADRVSWWELLVLASHAHPSVATMARTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSAWHGGSQIEPVKQLDVNNLLIGPEILALAEADVPPEDLVFHKFYTNKKSSSSKPKKKKKKPTDEDDVDDYFGDDIDGEDESDNEEIEDLLDSADPSLGPDGDFDYDDLDKVANEDDDDLIGDDVSDADIDIDIPSDIELDDADDTPFADDGSDDDNDIEIGDVDDATDDEEEEEDQVDKRKIKRKTGGKKGASPFASYEEFEHMLEDDDLTEKKPSKDKNKSKRKKMEDDSTEKKPSKDKNKSKKRKKKFAQ* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2152 1076 Coils Coil 612 632 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 437 460 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 627 754 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 29 43 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 666 711 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 931 999 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 56 70 - -
Tpr5g2152 1076 SUPERFAMILY ARM repeat 294 714 IPR016024 -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 71 95 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 29 111 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 875 1076 - -
Tpr5g2152 1076 Pfam CBF/Mak21 family 510 788 IPR005612 -
Tpr5g2152 1076 PANTHER CCAAT-BINDING FACTOR-RELATED 712 1041 IPR040155 -
Tpr5g2152 1076 PANTHER CCAAT-BINDING FACTOR-RELATED 14 639 IPR040155 -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 891 915 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 1031 1062 - -
Tpr5g2152 1076 MobiDBLite consensus disorder prediction 727 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2152 Tpr-Chr5 42363383 42372368 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2152 K14832 - gmx:100802669 1372.07