Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2146 ATGATGAAGTTCACCATAAGCTCTATTTTCTTCAATGTTTTTCTCATTATAACTCTTGTATTTCAAACTCATGCAAGCAAAATCAATTATAGAAGCAACAAGTACAAAGCCTTATTCATTTTTGGAGATTCTTTCTTAGATGCTGGCAATAACAATTACATAAACACCACAAGCCTTGATCAAGCAAATTTCTTGCCTTATGGAGAAACCTATTTCAAGTTCCCAACTGGTAGATTCTCGGATGGTCGTTTGATATCTGATTTTATTGCTGAATACGCAAATATTCCACTAGTTCCACCATTTCTACAACCTGGCTATAACCAATACTACAATGGAGTGAATTTTGCATCTGGTGGAGCAGGTGCACTTGTTGAAACTTTCCAAGGGTCGGGAATTCCTTTCAAAACACAAGCAAGAAACTTCAAGAAAGTAACAGCTTGGTTGAGGCACAAGTTAGGCAGTTCTGATTCCAAAACATTGTTATCAAATGCTGTCTACATGTTTAGCATTGGATCTAATGATTATCTTAGTCCAATCTTGACAAATTCTAATGTTCTAAAGTACTATTCTCATTCAGAATATGTTAGCATGGTTGTTGGTAACTTCACTTCCACTATCAAGGAAATACATAAAAGTGGGGCTAGAAAATTTGCAATCTTGAACTTACCACCATTAGGTTGTCTTCCAGGAACTAGAATAATTCAATCACAAGGGAAAGTTAGCTGCTTAAAAGAGCTTTCATCACTTACAAGTATACATAATCAAGCTCTTTATGTGGCTCTCTTAGAATTGGAGAAACAATTAAGGGACTTCAAATTTACTCTCTATGATTTGAACTCTGATATCACTCAAATGATCAACGATCCCTTAAAATATGGTTTGAAGGAAGGAAAATCAGCATGTTGTGGGAGTGGGTCATTTAGAGGAAAATATAGTTGTGGTGGAAAAAGAGGAGAGAAACACTTTGAATTATGTCACAAACCAAATGAACATTTATTTTGGGATTCTTACCATCTTACAGAAAATGCTTATAAACAATTGGCAGCTCGAATGTGGGATCATACTGGAAATTCTCACACTATTGGGAATTATATTATCAGTGATTTCTTCCAATAA 1116 0.3504 MMKFTISSIFFNVFLIITLVFQTHASKINYRSNKYKALFIFGDSFLDAGNNNYINTTSLDQANFLPYGETYFKFPTGRFSDGRLISDFIAEYANIPLVPPFLQPGYNQYYNGVNFASGGAGALVETFQGSGIPFKTQARNFKKVTAWLRHKLGSSDSKTLLSNAVYMFSIGSNDYLSPILTNSNVLKYYSHSEYVSMVVGNFTSTIKEIHKSGARKFAILNLPPLGCLPGTRIIQSQGKVSCLKELSSLTSIHNQALYVALLELEKQLRDFKFTLYDLNSDITQMINDPLKYGLKEGKSACCGSGSFRGKYSCGGKRGEKHFELCHKPNEHLFWDSYHLTENAYKQLAARMWDHTGNSHTIGNYIISDFFQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2146 371 CDD SGNH_plant_lipase_like 37 353 IPR035669 -
Tpr5g2146 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 371 IPR044552 -
Tpr5g2146 371 SUPERFAMILY SGNH hydrolase 38 354 - -
Tpr5g2146 371 Pfam GDSL-like Lipase/Acylhydrolase 38 349 IPR001087 GO:0016788
Tpr5g2146 371 Gene3D SGNH hydrolase 23 359 IPR036514 -
Tpr5g2146 371 PANTHER GDSL ESTERASE/LIPASE 5 2 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2146 Tpr-Chr5 42253031 42259995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2146 37 353 Acyl Lipid Metabolism Gene Families AT4G10950 30.341 2.67e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2146 - - gmx:100819379 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2146 5 42253031 42259995 Tpr5g2146 5 42253031 42259995 ECH