Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2082 ATGGGAAAAGTTCATCCTCAAGCAATAGTTTCATCTCCTACTTACAATATCACTTCCAAGCAAGAGACTTTCACTCTATGGATGAAATCTCTTGTATTGAATGGAAAAGGATGTACAGTCTTTGATTCCAATGGTCAAATTGCATATAGAGTTGATAATTATAACTCTAATCATAGAGATCAAGTTCATCTCATGGATCAAAGAGGAAATACTTTGTTTGCTATACTTAAAAAGCAATATAAATTATCTAGGTTTTGGGAGGGTTACAAACTTCCGGCGACAAGGAATGATCGGAAAGGACCAAGTTTTCGAGTTTCTAAAACTTATAGCATCTCTAAATGGGATTCAACTTATGAAGTTGAACTTGGATTGGACCAAAATAAACCATATAATTACAAAATAAAAAGAAGTGCTTGCAAATCATCTTACAAAATATCTGACAAGTTTGGAGTGATAATTGCTGAGCTAAGGAGAAAGAAGTCAACTTGTGGAATTGATTTAGGAGATGATGTTTTCACAATGGTGGTGGAACCAAACATTGATCTTTCTCTAATTATGGGAGTTGTTGTAGCTTATAACCTTATCAAAAGTAAAATGTAA 600 0.3333 MGKVHPQAIVSSPTYNITSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNSNHRDQVHLMDQRGNTLFAILKKQYKLSRFWEGYKLPATRNDRKGPSFRVSKTYSISKWDSTYEVELGLDQNKPYNYKIKRSACKSSYKISDKFGVIIAELRRKKSTCGIDLGDDVFTMVVEPNIDLSLIMGVVVAYNLIKSKM* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2082 199 Gene3D - 8 198 IPR038595 -
Tpr5g2082 199 PANTHER PROTEIN LURP-ONE-RELATED 11 2 198 - -
Tpr5g2082 199 Pfam LURP-one-related 17 190 IPR007612 -
Tpr5g2082 199 PANTHER - 2 198 IPR007612 -
Tpr5g2082 199 SUPERFAMILY Tubby C-terminal domain-like 17 195 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2082 Tpr-Chr5 41379630 41381011 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2082 - - gmx:100527543 311.997