Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2079 ATGGATCTCCCTAGCCACAAATTCATTCAACCTTCATCTTTCTTGGAACCAACCCTTGAAAACAAGAACATGAACATGTATGGTACTAAAAACAAGAACATTAACAACAATAACCCTTTTATTGATGATTTCATTGACCCTCTTTGCAAACTAAACCTAAAAGAAACATCTGAGTTTGTCAAATCTTTACCACTTCCAAATATCAATGCAGAAAACAGAAGATTCAGCAATGATTCTATAACACAAATAAGAAAACTAGAAGCACCTTCTACACCTGGTAGACCACTTTTCAGCTTCAGTTCATCTTCTTCTATTGTTGGAAGAAACAATCTTCCAAGAAAAAGTTTTCCATCTAAATGGGATGATGCTGAAAAATGGCTTATAAGCACTTCTTGTCATGACTCACCAGCTCATAAAGCTTCATCTTCAGAATCCTCAAGACAATGTGATAATAGCTTTAAGCAAAAAAGTGAAGATTTTTCAGTAAAATCAAGGGTCATTGAAGAAAAAGTGTTGTCTAAAGTTGGTCCTAATTTTCAATGTTCTTCTTCAACTTTGGACCACAATAATAGTACTGTTGGAGCTTTCAATGGGATCTCATGTCCAACAGACATAGTACTAAAAGATAAATTCACAGACAGCATAGAGCCAATTTTACCGAAATTCAGATATTCGGAACCGACAAAAGAAGGATTCTTATTCAGAAATCAAGCATGTGATTCCATGAATGATGCTTTCACAGAAGTGGTTCATGAAGTTAAACACAAAGATGCTGGCACAGAGATGACTCCATTAGGAAGTTCCACAACTTCAAGATGTCACACACCATTCAAGAGTTCGTCGCCTGCACGCCATAACACTCCTGCTAGTAGATCAGGACCGTTGGCATTATCTAACGCCGATTGCAACGATGTTATTCAGCTAGAAGAGTGTCATTTTGATAAACTACAATATGGAACAACAAAGTATGATTTGGTTGCACCAAATTGGAGTTCAAGTGAAGAGGAGGAAAAGGAAATATCGAAAAGTTTGAGACATAATGCTAGTTTGAAAGCTGATTCTGATTGTATAGCTGCAACTTGGGAAGAAGAGGAGAAGAACAAGTGTTGTCTTAGGTATCAAAGAGAAGAAGCAAAAATTCAAGCTTGGATAAACCTCCAAAATGCTAAAGCAGAAGCCAGGTCAAAAAAACTTGAGGTGAAAATCCAAAAGATGAGATCAAACCTAGAAGAAAAGTTGATGAAGAGGATGTCAGTGGTTCATAGGAAAGCTGAGGAATGGAGAGAAACAGCAAGGCAACAGCACTTAGAGCAAATGGAAAAATCAACTCAACATGCTAAAAAGATTATTCATAGGCATAACTCTCAATTTTCTAGGCACAATTCATGTGGATGCTTCCCTTGCAATAACAACTATTAA 1419 0.3672 MDLPSHKFIQPSSFLEPTLENKNMNMYGTKNKNINNNNPFIDDFIDPLCKLNLKETSEFVKSLPLPNINAENRRFSNDSITQIRKLEAPSTPGRPLFSFSSSSSIVGRNNLPRKSFPSKWDDAEKWLISTSCHDSPAHKASSSESSRQCDNSFKQKSEDFSVKSRVIEEKVLSKVGPNFQCSSSTLDHNNSTVGAFNGISCPTDIVLKDKFTDSIEPILPKFRYSEPTKEGFLFRNQACDSMNDAFTEVVHEVKHKDAGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLALSNADCNDVIQLEECHFDKLQYGTTKYDLVAPNWSSSEEEEKEISKSLRHNASLKADSDCIAATWEEEEKNKCCLRYQREEAKIQAWINLQNAKAEARSKKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRETARQQHLEQMEKSTQHAKKIIHRHNSQFSRHNSCGCFPCNNNY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2079 472 MobiDBLite consensus disorder prediction 262 294 - -
Tpr5g2079 472 PANTHER OS11G0616300 PROTEIN 1 469 - -
Tpr5g2079 472 MobiDBLite consensus disorder prediction 257 294 - -
Tpr5g2079 472 Pfam Remorin, C-terminal region 358 454 IPR005516 -
Tpr5g2079 472 Coils Coil 388 415 - -
Tpr5g2079 472 PANTHER OS02G0116800 PROTEIN 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2079 Tpr-Chr5 41318645 41323788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2079 - - gmx:100776089 613.224