Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2078 ATGCGGAAATCCGCTGCAGACAGATTCAGGCACCTTTTCAACCGTTCACTTGTTTTTGTTCGGAATCAACAAAATCAACAGCATCATCGTCTTTCTCCTATTCCATTGTCTTCTTCTCCTTTTTCATCAATGGCTTCTGATTCACCTTTCCCTGTCACCGCTCAAAATATTAACCCCCAGGTTCTAAAATGTCAGTATGCTGTTCGAGGAGAGATTGTTACACTTGCCCAGAATTTGCAAAAAGATTTGCAGGCCAATCCAGGCGCTCATTCCTTTGATGAGATAATTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCAGCCAATTACTTTTTTCCGAGAGGTTCTTGCTTTATGTGACTATCCAGCTCTTTTGGACAAAAGCGAGACACAGGGTTTGTTCAGTGCTGATTCAATAGAGCGAGCTTGGCAGATTGTGGATCAAATTCCTGGGAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTCAAGGGTTACGTGATACAATAGCCGCTGGAATCGGAGAGCGTGATGGTTTTCCTTGTAATGCCGATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTTACTAGATCAGAAAAGGATGGTATTTTGTGTCCCATCCCTCAGTATCCTCTCTACTCAGCCTCAATTACCCTCCATGGTGGCCACCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGACTGGAAATATCCGAACTCAAGAAGCAGTTGGAAGATGCTAAGTCCAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCCGGAAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAACGGGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTATATCAAGAAAACGTTTATGTTCCAGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGATCCATGGGATATGGCGACAATGATCTCTGCTTAGTATCTTTTCAGTCCGTCTCCAAAGGCTATCATGGGGAGTGTGGAAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTCCAGATGTGAGAGAACAGATTTATAAAGTGGCATCTGTGAATCTTTGTTCCAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCACCTAAGGTTGGAGATGAGTCCTACGAGTCATTTATGGCTGAGAAGAATGCTATTTTATCTTCCCTCACTAAGCGTGCAAAGTCACTGGAGGAAGCTTTAAACAAATTAGAGGGTGTAACCTGCAACAAAGCAGAAGGTGCAATGTATCTGTTTCCTCGGATCCGCCTGCCCGAAAAAGCTATCAAAGCTGCAGAGGCTGAAAAGACAGCACCAGATGCTTTCTATTGCAAACGCTTACTTAATGCCACAGGAATTGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTTAGGTGCACCATATTGCCTCAGGAAGATAGGATTCCGGCCATCGTCACCCGCTTGACAGAGTTCCATGAAAAGTTCATGAATGAGTTTCGTGATTGA 1590 0.4365 MRKSAADRFRHLFNRSLVFVRNQQNQQHHRLSPIPLSSSPFSSMASDSPFPVTAQNINPQVLKCQYAVRGEIVTLAQNLQKDLQANPGAHSFDEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRDTIAAGIGERDGFPCNADDIFLTDGASPAVHMMMQLLTRSEKDGILCPIPQYPLYSASITLHGGHLVPYYLDEATGWGLEISELKKQLEDAKSKGINVRALVVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDNDLCLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKNAILSSLTKRAKSLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHEKFMNEFRD* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2078 529 Pfam Aminotransferase class I and II 154 503 IPR004839 GO:0009058|GO:0030170
Tpr5g2078 529 Gene3D Aspartate Aminotransferase, domain 1 55 527 IPR015422 GO:0003824
Tpr5g2078 529 PANTHER ALANINE AMINOTRANSFERASE 2 44 528 - -
Tpr5g2078 529 SUPERFAMILY PLP-dependent transferases 54 523 IPR015424 -
Tpr5g2078 529 Coils Coil 408 435 - -
Tpr5g2078 529 CDD AAT_like 142 518 - -
Tpr5g2078 529 PANTHER ALANINE AMINOTRANSFERASE 44 528 IPR045088 GO:0008483
Tpr5g2078 529 Gene3D - 106 156 - -
Tpr5g2078 529 Gene3D - 157 403 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2078 Tpr-Chr5 41308755 41315234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2078 K00814 - gmx:100127413 906.36