Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2075 ATGAGAGAACCCAGAGATGCAACCAAAACCGATGTCAAAACCACCAAACCCGCTACATCCACTACTTCTTTCCCTCTCATTCTCGACGTCGATGACTTCAAGGGAGATTTCTCGTTCGATGCTTTGTTTGGGAATTTGGTGAACGATCTTCTTCCGTCGTTCAAATTAGAAGACCTTGAAGCGGAAGGTGCTGATTCTCAACCTAATGTGAATAAATTCTCGCAAGCTACCAATCCTTTGTTTCCTGAAGTTGAAAAGCTCTTGTCTTTGTTCAAGGATTCTTCTAAGGAATTGATTGAGCTACGTAAACAGATTGATGGGAGACTACATAATCTTAAGAAAGATGTTTCTGTTCAAGACACTAAGCATCGGAGGACACTAGCTGAGCTGGAGAAAGGTGTAGATGGGTTGTTTGAAAGCTTTGCGAGGTTGGATTCACGTATTTCAAGTGTTGGTCAGACAGCTGCAAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACTATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGTGATCTGATGGAGCTTTCTCCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCCCAAAAATTGCGGTCATTTGCTGAAGAAGATATTGGAAGACATGGTATAAATGTCCCATCTGCAGTGGGAAATGCAAATGCTAGCCGGGGATTAGAAGTTGCAGTTGCTAATTTACAGGATTACTGTAATGAACTGGAGAATAGACTGCTTTCTCGGTTCGATGCAGCGTCGCAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTATCTCAGTTCAACAGGGGCACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGACGTGGAAGTAATGAATGCAGACACGAGGCTTGTTCTTGGTGACCAGGCTGCACAAACTAGCCCTAATAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGTAAAGAGGCTGCAACAATCACTGCTGTATTCCCTTCACCGAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAGTCACCGCCATTTTGGACAAACTATTAGTTAAACCATCTCTTGTAAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTCTATCTTCGAATGCTAGCAGTGGCGTATGAGAAGACCCAAGAACTTGCCAGAGATCTCCGAACTGTAGGATGCGGTGATTTGGATGTTGAGGGCCTGACAGAGTCCCTGTTTTCAAATCACAAGGATGAATATCCTGAATATGAGCAGGCAGCTCTTAGACAATTATATAAAGTGAAGATGGAAGAATTACGTGCTGAAAGTCAGATTTCTGATTCATCTGGTACAGTTGGGCGCACAAAGGGTGCTACAGTAGCTTCTTCTCAGCAGCAAATATCTGTCACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCACAAGATGTAATCTCTTTTCTTCCCAGGCTGCTACACTGGCTACCCATGTAAAAGCAGTGTTCACTTGCCTCCTAGACCAAGTTAGTCAATATATAGCAGACGGTCTTGAACGGGCTAGAGACGGTTTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACTAGTGTTAGCCGTAGGGTGGCTGCTGCAGCCGCATCTGCTGCGGAGGCTGCAGCTGCAGCTGGTGAAAGCAGTTTTAGATCTTTCATGGTTGCTGTACAACGTTCGGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCCAATTCAATATCTAGGCTTTTGCTTCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCCAGTGCAGAGGCTGCTGCTTATAAAGGACTACAACAATGTATTGAAACCGTCATGGCTGAGGTAGAGCGATTGCTTTCAGCTGAGCAAAAGGCTACAGATTACAAAACAAATGATGATGGAATGGTTCCTGACCACCGGCCAACTACTGCCTGCACAAGGGTTGTGGCTTATCTTTCGCGGGTGCTGGAGTCTGCATTCACTGCTTTAGAAGGTCTTAACAAACAAGCATTTTTGTCTGAATTGGGAAATCGCTTGCACAAGGTTTTGCTAACCCATTGGCAGAAATATACTTTCAATCCAAGTGGGGGATTGCGGCTGAAGCGTGACATTACTGAGTATGGAGAGTTTGTACGCAGTTTCAATGCTCCTTCTGTTGACGAGAAATTTGAATTGTTGGGCATAATGGCCAATGTATTTATTGTTGCTCCTGAGAGCCTTGCAACTTTGTTTGAGGGCACACCCAGCATTCGGAAAGATGCACAAAGATTTATTCAACTTCGGGACGACTACAAGAGTGCCAAGCTTGCATCCAAATTGAGTTCCTTGTGGTCTTAA 2469 0.4407 MREPRDATKTDVKTTKPATSTTSFPLILDVDDFKGDFSFDALFGNLVNDLLPSFKLEDLEAEGADSQPNVNKFSQATNPLFPEVEKLLSLFKDSSKELIELRKQIDGRLHNLKKDVSVQDTKHRRTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGINVPSAVGNANASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAQTSPNNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRVTAILDKLLVKPSLVNLPSMEEGGLLFYLRMLAVAYEKTQELARDLRTVGCGDLDVEGLTESLFSNHKDEYPEYEQAALRQLYKVKMEELRAESQISDSSGTVGRTKGATVASSQQQISVTVVTEFVRWNEEAITRCNLFSSQAATLATHVKAVFTCLLDQVSQYIADGLERARDGLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYKTNDDGMVPDHRPTTACTRVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLLTHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLATLFEGTPSIRKDAQRFIQLRDDYKSAKLASKLSSLWS* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2075 822 Coils Coil 240 260 - -
Tpr5g2075 822 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 20 821 - -
Tpr5g2075 822 Gene3D - 655 816 - -
Tpr5g2075 822 Pfam Exocyst complex component Sec10 135 471 IPR009976 GO:0005737|GO:0006887
Tpr5g2075 822 Pfam Exocyst complex component Sec10 484 816 IPR009976 GO:0005737|GO:0006887
Tpr5g2075 822 PANTHER SEC10 20 821 IPR009976 GO:0005737|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2075 Tpr-Chr5 41267096 41276998 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2075 K19984 - gmx:100820430 1374.38