Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1585 ATGGATTCCTCTTCCGACGAAGAAGACGACCACCACCACCTCATCAACCAAAACTCAACAAAACCTCGAACTCCTCCCTCCATCACCACCACCTCCGCCGCAGCATTTCACGTCGAAGATCTCAACTCACGACTCCGGCGAACCAATTTCACCTTCCAGAAAAAGTACATTATCGCCATTTTCGTTATCCTCATCGTCGTTCTCCTATTCTCAATTCCTAATCTCCGTCGTTACTTCTCCACCGCATCATTCATCTCCGATTCAATTTCCGATAAAATGAAGGAATCTGAATTACGCGCCATTTACCTCTTGCGTCAACAACAACTCGCTCTTTCCACCGCTTTCAACGATTCCAATGTCGAAGATCTGAAATCTGCACTATTCAAGCAAATTTCAATCAACAATGAAATTCAACAGATTTTGTTGAATCCGCATAGAACAGGCAAATTGATTGATCCTGAATTCAATTTCCGAAAATTGAATTTTACTAGTGGAAATTATGATAGGTGTAGAACAATTGATCAGAATTTATCAAAGAGAAAAACAATTGAATGGAACCCTAAAAATGGGAAATTTTTGGTAGCTATTTGTGTTTCAGGTCAAATGTCAAACCATTTGATTTGTTTGGAAAAGCATATGTTTTTTGCTGCTCTTCTTAATAGGGTTTTGGTGATTCCAAGTTCTAAAGTTGATTATCAATATGATAGAGTTGTTGATATTGATCATATTAATAAATGTTTAGGGAAAAAAGTTGTTATTTCTTTTGATGAATTTTCTAATGTTAAGAAGAATCACATGCATATTGATAAGTTTCTTTGTTATTTCGCTTTGCCGCAACCTTGTTATTTGGCTGATGAGAAGGTCAAGAAGTTGAGTGGTTTGGGTTTTTCTATGAGTAAACCTAAGGCTGTTTGGGATGATGAGGATACTCGGCATCCGAAGAAGAAGACTGTTCAGGATGTTTTGGCTAAGTTTTCTTATGATGATGATGTTATGGCGATTGGTGATGTTTTTTATGCTGAAGTGGAGCATGAATGGGTTATGCAACCGGGTGGACCGATTGCTCATCAATGCAAGACTCTGATTGAACCTAATCGCCTTATTTTGCTTACTGCTCAGCGGTTTATTCAGACATTCCTTGGAAGGAATTTCATTGCGTTGCATTTTCGGAGACATGGTTTTTTGAAATTCTGTAATGCTAAAAAACCAAGTTGCTTTTACCCCATCCCTCAAGCAGCAGATTGCATCTTAAGGGTGATTGAAAGGGCCGATGCACCCATCATATATCTTTCTACGGATGCAGCAGAAAGTGAAACTGGTCTGCTTCAGAAACTGGTTGTGCTAAATGGCAAGCCTGTTCCACTTGTAATTCGGCCAGCCCGGAATTCAGCAGAAAAGTGGGATGCTTTGTTATACAGGCATGGTATTGAGGGAGATTCACAGGTCGAAGCTATGCTGGACAAGACTATATGTGCCATGTCTAGTGTGTTCATTGGAGCACCGGGTTCCACTTTCACTGAAGACATCCTGCGATTGAGAAAGGACTGGGGATCAGCATCGTTGTGTGATGAGTACCTTTGCCAAGGTGAAGAACCGAATATTGTAGCGGAAAATGAATGA 1620 0.4019 MDSSSDEEDDHHHLINQNSTKPRTPPSITTTSAAAFHVEDLNSRLRRTNFTFQKKYIIAIFVILIVVLLFSIPNLRRYFSTASFISDSISDKMKESELRAIYLLRQQQLALSTAFNDSNVEDLKSALFKQISINNEIQQILLNPHRTGKLIDPEFNFRKLNFTSGNYDRCRTIDQNLSKRKTIEWNPKNGKFLVAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKVDYQYDRVVDIDHINKCLGKKVVISFDEFSNVKKNHMHIDKFLCYFALPQPCYLADEKVKKLSGLGFSMSKPKAVWDDEDTRHPKKKTVQDVLAKFSYDDDVMAIGDVFYAEVEHEWVMQPGGPIAHQCKTLIEPNRLILLTAQRFIQTFLGRNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCILRVIERADAPIIYLSTDAAESETGLLQKLVVLNGKPVPLVIRPARNSAEKWDALLYRHGIEGDSQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSASLCDEYLCQGEEPNIVAENE* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1585 539 CDD O-FucT_like 355 513 - -
Tpr5g1585 539 PANTHER - 116 539 - -
Tpr5g1585 539 PANTHER - 3 116 - -
Tpr5g1585 539 Pfam GDP-fucose protein O-fucosyltransferase 213 513 IPR019378 -
Tpr5g1585 539 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g1585 539 Gene3D - 358 523 - -
Tpr5g1585 539 MobiDBLite consensus disorder prediction 1 17 - -
Tpr5g1585 539 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 116 539 IPR045130 GO:0036066|GO:0046922
Tpr5g1585 539 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 3 116 IPR045130 GO:0036066|GO:0046922
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1585 Tpr-Chr5 30335432 30339075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1585 K03691 - gmx:100776069 848.195