Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1570 ATGAGTGAGCACACACTTCTGCTACGCTCATACCACAACTTGTCTTGTCTTGTCCCTTCTCTCTCTCTCTTCTCTCCTTCACCAATACAAATCTCTCTCTCTCCTCTCTCTCTGCACTATACCACTCCTATATATATCTATCATCATCACACACGCCACAGGTATTATAGGGCGGTTCCAAAAACAGATAAAATAACTACATTTTCTTCAATTCCCTTACCCCTTTTGACTGTGGCGAGAATCTTCAGAATGGTAGTAGCTGCTGGTTCTAAGTTCAATTTGAGAAGAGGAAACAGTGGTTCTTGTTCTTCTCATAATAATGTTGTTATCAATGACTGTGATGGAGGAGAGTTTTCTAGAATTAATAAAAGTGGTTGTTATTCATCAATGGTAGAAGTTGATAAAGACCTTTCTTGTGTTTCATTCACTACTTTCAATATTCTTGCTCCTATTTACAAACGGATTGATCCACAGAACCAAGGAGTTAGAGAAAGTGATTGCAGATCATTTTGGTTAGCTAGGAATCAAAGGATTCTTGATTCATTGCTTTCTGAATCATCTTCCATTATGTGCCTACAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCACATGTATGAGGAAAGACTCGGGGATGCTGGCTATCAACTTTTCAAGCTTGCTCGAACCAACAACCGTGGAGATGGTCTGCTGACTGCTATACGTAAAGACCATTTAAGTATTGTGAATTATCGAGAATTGCTTTTCAATGACTGTGGTGACCGTGTTGCTCAGTTGTTACATGTTCAATCGGTTAATCCCATTTTACAAAACCAAAAAGACAGTCTCAATCAAGAGTTTCTGATTGTGAATACTCATTTATTATTTCCTCACGATTCAAGTCTGTCTATAGTGAGATTGGATCAGGTTTATCAAATATTAGAATATGTGGAACGGTATCAGAGAGAAAACCGGCTCAAACCGATGCCTATTATACTCTGCGGTGACTGGAACGGAAGCAAGCGCGGACATGTTTACAAGTTCCTTAGGTCACAAGGGTTTGTATCATCTTATGATATTGCCAATCAATATACTGATAGTTATGCCGATGCGCACAAGTGGGTTAGTCACAGAAATCATAGAGGAAATATATGTGGTGTTGATTTCATTTGGCTTTGCAATCCTAACCAAGCGCGTAAACCCATGAAAACAAGTTGGGCTGAAGCTGTTTTTAGTATACTAAAGTTCCAGCTTCGGAAGGCGTCATTGTCTGAAGATGATGCATTCACCTTTCTGAAGGGTGACAACTGTGCTGATTCTGTGACATATTTTAGTTTTTCTGAAGCACTTCGTAAGGTAAAGTTAATTGGTGTGCCTTATGGACTATGCTTCCAACAGTTGCAAGATCTATGGAATCAAGTTGATGTAGATGGAAATGGTGTCATCGACTTCGAAAAATTCAAGCAAAAGATTTGGAATTCTACATGTTCAGAGCATGTGTGTATGGACGATTCTAACACCGAGCAGGAGCATGAAGCCGTTGGTTTCAAGGTGAAGAACGCAATGTTGTTTCCTCGTGAAATGGAGAAAGGACTTTGGCCAGAAGATTACTCTCTTTCTGATCATGCTAGGTTAACTTGTGTATTTTCACCAGCAAAGATGTCATGTTCTTCGCTATAA 1659 0.3936 MSEHTLLLRSYHNLSCLVPSLSLFSPSPIQISLSPLSLHYTTPIYIYHHHTRHRYYRAVPKTDKITTFSSIPLPLLTVARIFRMVVAAGSKFNLRRGNSGSCSSHNNVVINDCDGGEFSRINKSGCYSSMVEVDKDLSCVSFTTFNILAPIYKRIDPQNQGVRESDCRSFWLARNQRILDSLLSESSSIMCLQEFWVGNEELVHMYEERLGDAGYQLFKLARTNNRGDGLLTAIRKDHLSIVNYRELLFNDCGDRVAQLLHVQSVNPILQNQKDSLNQEFLIVNTHLLFPHDSSLSIVRLDQVYQILEYVERYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPMKTSWAEAVFSILKFQLRKASLSEDDAFTFLKGDNCADSVTYFSFSEALRKVKLIGVPYGLCFQQLQDLWNQVDVDGNGVIDFEKFKQKIWNSTCSEHVCMDDSNTEQEHEAVGFKVKNAMLFPREMEKGLWPEDYSLSDHARLTCVFSPAKMSCSSL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1570 552 SUPERFAMILY EF-hand 436 484 IPR011992 -
Tpr5g1570 552 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 89 549 - -
Tpr5g1570 552 Pfam Endonuclease/Exonuclease/phosphatase family 171 354 IPR005135 GO:0003824
Tpr5g1570 552 Gene3D Endonuclease/exonuclease/phosphatase 126 548 IPR036691 -
Tpr5g1570 552 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 89 549 - -
Tpr5g1570 552 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Tpr5g1570 552 SUPERFAMILY DNase I-like 139 363 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1570 Tpr-Chr5 30183481 30187417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1570 205 550 EF-hand Containing Proteins AT1G02270 66.856 1.51e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1570 - - gmx:100777138 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1570 5 30183481 30187417 Tpr5g1570 5 30183481 30187417 ECH