Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1540 ATGGCCTTAATCACTTCTTCTTCACTCACTATATCCTCTTCATCTTTTGAATGCAAGACTCCTTTTCAATCATTAGCTTCTTCTCCACAATGTGTGAGCCTTTCCACTCTTCCATCACTCCCTTTGTTGTCTCAAAATCATGCATTGAAGACCAATTCTCATTATCGAAAGATTGGTCGCGAAGTTATGGTAATGGCAACAGGTGATGCACCAGCAGAAACTGATGTGCCTGAGTTTGTTAAGTCTCTTCAAGATGCTTGGGACAAAGTTGATGATAAATATGCAGTGGGCTCATTGGTTGTAGCTAGTGTGATTGCACTATGGGGTTCAACTGGTTTGATCTCAGCAATTGACAGGCTTCCCTTAATTCCTGGGGTTCTTGAGTTAATAGGAATTGGTTACACTGGGTGGTTTGCATACAAGAACCTAGTTTTCAAACCAGAAAGGGAAGAACTTGTACAAAAAGTAAAGGAAACAGTTACTGAAATAATTGGGAACAAATAA 504 0.3988 MALITSSSLTISSSSFECKTPFQSLASSPQCVSLSTLPSLPLLSQNHALKTNSHYRKIGREVMVMATGDAPAETDVPEFVKSLQDAWDKVDDKYAVGSLVVASVIALWGSTGLISAIDRLPLIPGVLELIGIGYTGWFAYKNLVFKPEREELVQKVKETVTEIIGNK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1540 167 PANTHER - 1 166 IPR033344 GO:0009579
Tpr5g1540 167 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 165 IPR025564 -
Tpr5g1540 167 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1540 Tpr-Chr5 29397621 29399614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1540 - - mtr:MTR_8g024180 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1540 5 29397621 29399614 Tpr5g1540 5 29397621 29399614 ECH