Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1531 ATGGGTAATTGTGTATTCAAAGGCTTTCATCATGGAGATTTTGAAGACACAATGGTAAGAATTTTAACATCAAATGGAGGCATTATGGAATTTTACTCTTCCATAACGGTGGAATGCATAACAAACGAGTTCCCTCACCATGGGATTTTCAAAAACAACTGCAACACACTCTCTAAACCACTCTCGAAAAACGAGGAACTTCAAGGTGGGGAAGTTTACTATCTTCTCCCTCTCAAAAACATGACCAACAAACAATTTAGTGAAACATTCGAAACGTTAACTCCGTATCGAATGTCCACGTGTGAGAAGAATAGCAGCAGGAGCAACAACAACAATAATATGTGGTCGGAACATGAAGTGTTTTCGAGATACAATAGTATTGGAGTATGGAAGGTGAAATTAGTGATTAGTCCGGAGAAATTGTCGGAAATTTTGTCGCAAGAATCGAGGACAGAGGCATTGATTGAGAGCGTAAGGACGGTGGCTAAGTGCGGTAATGGGGTGCCATCTTCCGTGGCAAACTCCGATAAGTGGAGTTTGTCTAGTAGTTTTAAAGGTTCTACGTTATTAGACAATTTTAATTTAGAATCTTCAAGTTCAAATTAG 606 0.3911 MGNCVFKGFHHGDFEDTMVRILTSNGGIMEFYSSITVECITNEFPHHGIFKNNCNTLSKPLSKNEELQGGEVYYLLPLKNMTNKQFSETFETLTPYRMSTCEKNSSRSNNNNNMWSEHEVFSRYNSIGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGVPSSVANSDKWSLSSSFKGSTLLDNFNLESSSSN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1531 201 Pfam PADRE domain 1 155 IPR025322 -
Tpr5g1531 201 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 183 - -
Tpr5g1531 201 PANTHER DUF4228 DOMAIN PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1531 Tpr-Chr5 29254170 29255437 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1531 - - lja:Lj3g3v2515210.1 274.633