Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1509 ATGCAGCAGACACCGCAAATGATTCCTATGATGCCTTCATTCCCACAACCAAACATAACCACCGAACAGATTCAAAAATATCTCGACGAAAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTCGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAAGCACCAGCCTTGCCACCACAGATGGCCCCGCACCCTGCGATGCAACAAGGATTCTATATGCAACATCCTCAAGCTGCAGCAATGGCTCAACAACAAGGAATGTTCCCTCAAAAAATGCCAATGCAATTCGGTAATCCGCATCAAATGCAGGAACAACAACAACAGCAGCAGCAGCAGCAGCAGCTACATCATCAGGCTATGCAAGGTCAAATGGGGCTTAGACCCGGAGGGATAAATAACGGCATGCATCAAATGCACAACGAGGCTGCTCACGGAGGTGGCGGAAGTGGTGGTCCAAATGATGGACGTGGTGGTGGAAACAAGCAAGATGCTTCGGAAGCTGGCACAGCCGGTGGAGATGGTCAAGGAAGCTCTGCCGCTACCGCGCACAACAGTGGAGATGCTTCAGAAGAGGCAAAGTGA 642 0.4907 MQQTPQMIPMMPSFPQPNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPALPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQEQQQQQQQQQQLHHQAMQGQMGLRPGGINNGMHQMHNEAAHGGGGSGGPNDGRGGGNKQDASEAGTAGGDGQGSSAATAHNSGDASEEAK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1509 213 MobiDBLite consensus disorder prediction 118 140 - -
Tpr5g1509 213 Pfam SSXT protein (N-terminal region) 17 73 IPR007726 -
Tpr5g1509 213 PANTHER BNAA09G51550D PROTEIN 1 187 - -
Tpr5g1509 213 MobiDBLite consensus disorder prediction 162 213 - -
Tpr5g1509 213 MobiDBLite consensus disorder prediction 191 205 - -
Tpr5g1509 213 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 187 IPR044779 GO:0003713
Tpr5g1509 213 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1509 Tpr-Chr5 28780277 28784715 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1509 - - gmx:100804074 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1509 5 28780277 28784715 Tpr5g1509 5 28780277 28784715 ECH