Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1485 ATGGAAACCAACAAGAACATGAATCAAACCTCAACCACTACAATCATAGAAGCAGAGTTTGAGGATTTGCTACCAGTGATGGCAGAGAAACTTGATGTAGAAACCTTTGTATCTGAACTATGTAATGGTTTTAATCTTCTTGCAGACCAAGAAATAGGTTTGATCACAAGTGAGAGTCTTAGGAAAAACTCAGCTATGCTTGGTATGGATGGAATGAGTAAAGAAGATGCTGAAGCTATGGTCAAACAAGGTGATCTTGATGGAGATGGAAAATTGAATGAGACTGAATTTTGCATATTGATGGTTAGGCTTAGTCCTGAAATGATGCAAGATGCTGAGACTTGGTTGGAGAAAGCAATTGAGGAACAGCCAAAAAATTAA 381 0.378 METNKNMNQTSTTTIIEAEFEDLLPVMAEKLDVETFVSELCNGFNLLADQEIGLITSESLRKNSAMLGMDGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQPKN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1485 126 Gene3D - 17 126 - -
Tpr5g1485 126 SUPERFAMILY EF-hand 25 121 IPR011992 -
Tpr5g1485 126 PANTHER CALCIUM-BINDING PROTEIN KIC 10 123 - -
Tpr5g1485 126 PANTHER CALCIUM-BINDING PROTEIN KIC 10 123 IPR044205 GO:0005509
Tpr5g1485 126 ProSitePatterns EF-hand calcium-binding domain. 85 97 IPR018247 -
Tpr5g1485 126 Pfam EF-hand domain pair 53 103 IPR002048 GO:0005509
Tpr5g1485 126 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1485 Tpr-Chr5 28236229 28236868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1485 9 123 EF-hand Containing Proteins AT2G46600 70.435 4.18e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1485 K24345 - gmx:100801586 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1485 5 28236229 28236868 Tpr5g1485 5 28236229 28236868 ECH