Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1482 ATGGCGGATTTGATGGGATCACGGGCATACTGCTGCTTCAAGTGCCAGAACCTTGTTGCTTTCCATGATGATATTGTTTCCAAAGATTTTCAGGCAAGTAATGGAAGAGCTTTTCTGTTTTCTCATGCTATGAACATATTTTTGGGACCTAAAGAAGATAGACAGCTTATGACTGGTCTTCACACAGTTGCTGATGTTTATTGTTCTGATTGTGGTGAAGAACTTGGTTGGAAATACATTAAAGCTTATGAAGAAACACAGAAGTATAAAGAAGGAAAATGTGTGCTTGAGAAGTTCAAGATTGTTTTAGGAAATGGGTAG 321 0.3801 MADLMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIFLGPKEDRQLMTGLHTVADVYCSDCGEELGWKYIKAYEETQKYKEGKCVLEKFKIVLGNG* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1482 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Tpr5g1482 106 PANTHER PROTEIN YIPPEE-LIKE 3 103 - -
Tpr5g1482 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 3 103 IPR039058 -
Tpr5g1482 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1482 Tpr-Chr5 28215038 28217245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1482 - - gmx:100788878 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1482 5 28215038 28217245 Tpr5g1482 5 28215038 28217245 ECH