Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1447 ATGGCACCAAGATACAGTCGTGGAAAGGCTAAGGGAGAGAAGAAGAAGAAGGAAGAGAAGGTTCTTCCTGTTGTCATGGATATCACAGTGAACCTTCCAGATGAAACTAGTGTTGTTCTCAAGCAGGGAATATCAACGGATAGAATAATAGATGTTCGTCGGCTTTTATCGGTGAATACAGAGACGTGTTACATCACAAACTTTTCACTATCACATGAGATAAGAGGTGTACGTTTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCATGCCTCCTCACTTTAGTTGAAGAGGATTACGATAACGATGGAGCGGTGGCTCACGTGCGAAGACTACTGGACATCGTTGCCTGCACCACCAGCTTCGGTCCGTCGTTTCCGCCGAAGAATGCGGCGAAATCGGGCAAATCTCAACCGCCTCCGGAGAAGCAATCACCGAAAGACGCTGCCACGGCGGACGCAGACGGAGAGATAAGCCACTCGTGCCCTAAGCTTGAGAGTTTCTACGAGTTTTTCTCTCTTTCACATCTCACTGCACCTCTTCAATATGTGAAGAAAGCTTCGAAGCGACATGTGGAGGAGATATCGGAGGAGGATCATCTTTTCTCGATTGATGTGAAGGTGTGTAATGGGAAAGTGGTGCACGTTGAGGCTTGCCGAAAGGGGTTTTACAGTGTTGGGAAGCAGAGGATTCTGTGTCATAATCTCGTTGATTTGTTGAGACAGATTAGCAGAGCTTTTGACAATGCTTATGACGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGAAATCTCCCCTATGGCTTCAGATCCAACACGTGGCTTGTTCCTCCTGTTGCAGCACAATCACCATCATTTTTTCCTCCTCTTCCAGTGGAGGATGAAAATTGGGGAGGAAATGGTGGTGGTCTTGGAAGAGACGGAGAGTATGATTTGATTCCTTGGGCCAGCAAGTTTTCTTTTATTGCATCTATGCCCTGCAAGACAGCAGAAGAAAGGCAAGCTCGTGATAGAAAAGCATTTCTTCTGCACAGCTTGTTTGTTGATGTTGCCATTTTCAGAGCAATTAAGGCTGTTAAACATGTTTTGGAAGATCCCAGTTATAGATGCTTAGTAGCAGAAAATGATATTTACAGCGAGAGAGTAGGTGACTTGAGTGTTAGAGTCTTGAAAGATGGTTCTGTTGCAAGCTGTAAGATTGATTCCAAAATTGATGGAGTTGAAGCTACAGGAGTAAATCAAAAGGATCTAGTCGAACGGAATTTACTGAAAGGGATAACAGCAGATGAAAATACTGCGGCCCATGATTCTACCACTTTAGGTGTTGTTTACGTAAGATATTGTGGTTATGTTGTTGTTGTGAAAGTTGAAGGCGAAGTTGATGAAAAAGTCAAAGTCAATACTTTATCTCATCAAAATAATGAATTGTTTGATCAGCCAGAGGGTGGTGCCAATGCACTAAATATTAACAGTTTAAGATTTCTTCTTCACACCACAGCTCTACCGGAGAACAATAAACAGATGACCGAGATACAATTGTCTGAGAGTGAAGAGCTTGGCGGTGATACAGACACTTTTGTGGAAAATCTGATTAAAAAAAGCCTTGCTAAGCTTGAGGAAGAGGAACTGACTTCGGACTATTTTGTAAGATGGGAACTAGGTGCGTGCTGGGTACAACATTTGCAAGACCAAAACAATACAGAAAAAGATAAGAAACCATCGTTGGAGAAGGCTAACAATGAAATAAAGGTTGAGGGTCTTGGGAAACCCCTCAAAGCCCTCAAGAATAATAAAAAGAAATCTGATTCAAGCAATCCTAATTTTGAATCCGAACATTCAAAATCTAATCTCGAGGCTGAAAATGCTGCCTTGTCCTCAAGTGAATGCCAGCATGAAGCTGCGGCAGCTGAGAATGAGCTTGTGCTGAAACAGATGTTATCTGAGGCAGCTTTTACCCGATTGAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATTCAAGATTTGATCGACTTATCTCAGAAATATTACATGGATGTTGCTATCCCAAAACTGGTAGCAGATTTTGGCTCATTGGAACTCTCTCCAGTTGATGGCCGCACGCTAACTGATTTTATGCATACTAGGGGTCTACGAATGCGATCTCTTGGGCACGTTGTCAAGCTTTCTGAAAAACTTTCACATGTGCAATCACTTTGCATTCATGAGATGATAGTTCGAGCTTTCAAGCACATCCTGAGGGCAGTGATTTCTGCTGTTGTTGACAAGGAGAAAATGGCTTCATCAATAGCTGGTGCATTGAATTTGCTGCTTGGTGTTCCTGAAAATAGAGAAACGGATAAATCATGTGATGTCCACCCTCTTGTGTGGAAATGGCTAGAGTTGTTTTTGAAGAAACGATTTGACTGGGATCTTAACAGGTTGAACTATAAAGATGTGAGGAAATTTGCAATTCTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTCGTTCCAAGGGATTTCGACATGGATTCTCCATTTCCCTTCCAAAAAACTGATATTGTTAGCTTGGTCGCAGTTCACAAGCAAGCAGCATGCTCATCTGCAGATGGAAGGCAGCTCTTGGAGTCCTCCAAAACAGCTTTAGACAAGGGAAAGCTTGAAGATGCTGTTACCTATGGGACAAAGGCTCTTGCGAAGCTTGTAGCAGTTTGTGGTCCCTACCATCGGATGACAGCAGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCACACCGGAGACTTCAATCAGGCTACAATTTATCAACAAAAAGCTTTAGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACAGAGCTGGCTCTTAAATATGTGAAGCGTGCTTTATACCTTTTGCATCTGACATGTGGCCCTTCTCATCCAAATACTGCTGCAACTTACATTAATGTGGCTATGATGGAGGAAGGTCTGGGAAATGTACACATTGCTCTCAGATATCTTCACAAAGCATTAAAGTGCAACCAAAAGTTACTTGGTGCAGATCATATTCAGACAGCTGCAAGTTACCATGCTATAGCAATAGCACTCTCGTTGATGGAAGCATATCCATTGAGTGTGCAGCATGAGCAAACAACTTTGCAAATTCTGCGGGCAAAACTTGGCCCGGATGACTTGCGAACACAGGATGCTGCAGCTTGGCTTGAGTATTTTGAGTCCAAGGCATTTGAACAGCAAGAAGCTGCTCGAAATGGCACGAGAAAACCTGATGCATCAATAGCTAGCAAAGGTCATCTAAGTGTGTCGGATCTTCTTGACTACATCAATCCTAATCACGATACCAAAGGGAGAGATGCAGCAGCAAAGAGAAGAAACCAGGTGCGAGCAATATCCTACCAGAACAATGTCTCAGCAAGTTCTGATGAGTCTTCAAAAGAAATCCAAAAAGAGGCTTCAGATGAAGAGCTACATATACCTGAAACAGGAGGTAGTGCAGATTCTGAGAATGAAACCAACTCGGCACCTGATCCAGAACTGCCAATTTTAGAAAAGATCTCGGACGAAAAGCCACAAACTTCTAATGATTTATTGTCTGAAGTTCATCCTGATGGAGATGATGGATGGCAATCAGTTCAAAGACCAAGATCAGCTGGTTCATATGGCCGGCGAGTGAAACAAAGACGGGCAACTCTTGGCAAAGTTTATAGTTACCAGAAGAATGTGGAAGTTGGTACTGAACAACATCCTTCGGTAAAAAGTGCTACTCAGAATAGTAAGTATTATTTCTTGAAGAAGAGGACAACACACCATGGGGGTTATGCAGATAATCGTGCTGTGAACATCAGCCAAGGCACTAAATTCGGAAGAAAGGCAGTCAAGGCTGTTGCATACAGGGTCAAGTCTACGCCATCTGCTTCTAAGACCATTGTAAATGAGACACCAGAAATTGGTGACAAAGAACCTGATTCAGTTGATGTTAATCCAGTTAAGACCCCTATAGTCAGTCTTGGTAAAAGTCCATCATACAAGGAAGTAGCCTTGGCTCCTCCTGGGACAATCTCCAAGTTGCAGGTCTATAATCCTCAAAGTGAGATTCCTATTAGTCATGAATGCGATGTTGGAAAACACAAAGAGGAAGATATCGAAGCTCATAGAAACATCAATCCAACCCCAAAAGGGGCAAATAATGCGTTTAAAGAGAAATCTGATGATTCTTTGTCTGATTCAATAGAAGATTCACAAGATGATACTGTAGTTTCTACTGAGATGAAAGAAGAAACTCAGTTGAACAAAGTTGTTCAAGATAATTGTGTGACTTCTGAGGGGCTTGAATCTGGGGACGTTGAAGCACAAGGAGCTGTTGATAACAGCATAGTGATTGATGGAGTAGAGAATGTTGTGGACTCTTACACACAAGAACTTATTACAAGTAATTTGCCTTGCAGTTTTGAACCTTCTGATAATATAAATTCTAGTCCACGTGGTAGTGAGGATTTAGGCCTCAACTTATTATCACCTAGTCAGAGTCAAGCTGGGGGCATCTCCTATAAGAAATTGTCTGCATCAGCAGCGCCATTCAACCCATCACCCGCCATTGCACGTGCTGCACCTATTGCCATGAATATGACTCATCCTTCTGGCCCCGGTCCTGTTCCAGGTATTGGCCCCTGGCCAGTAAACATGAATGTTCACCCTGGACCTGGTACTGTGCTACCTGCTGTTAACCCTATGTGTTCCTCTCCTCACCATGCATATCCATCTCCTCCAACAACACCAAACATGATGCAGCCATTGCCATTCATGTATCCTCCTTATACTCAACCTCAATCAATACAAACCAGCAGTGCTTTTCATGCCAATCATTTTACATGGCAGTGTAATTTGAACCCTGTCATATCTAAGTTTGGTCCTGGTGCTGTTTGGACTGGTTGTCATCCTGTGGAATTTCCTCGTCCAGTACCTATTGTTGAATCAATCCCTGATATCATTTCTGAGCCACAAGTGCACTCTTATACCGTTGAAAGTCCAAGTTCAGCTTCAGTTCTGCTTGAGGACATTGATAAGCTTGGGGATTCTAATAAAGAGGTAAAAACTTCAGCACCAGAGATTAATGAAGATGGAACAGTGAGAGTTGATTTAGAAAGTATAAAAGAAAATGGTAATCTAAATTTTTCCGCGACCAACACTGCTGGGAACGAACCAAATCAAAATGTTGGCTCGAACAACAGCACTAACAGTAGTGAAATGAACATGGATGATGAGAAAACGTTTAGCATTTTGATTCGTGGAAGAAGAAACCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACCCGACCCCATGGCTCCCAGTCATTTAAGGTTATCTATAACCGTGTAGTTAGAGGAAATGATTCTCCAAGGTCCATCAATTTCTCTTCTAGTAAACATTGTACAGCTTCTGCTTAA 5496 0.4267 MAPRYSRGKAKGEKKKKEEKVLPVVMDITVNLPDETSVVLKQGISTDRIIDVRRLLSVNTETCYITNFSLSHEIRGVRLKDTVDVSALKPCLLTLVEEDYDNDGAVAHVRRLLDIVACTTSFGPSFPPKNAAKSGKSQPPPEKQSPKDAATADADGEISHSCPKLESFYEFFSLSHLTAPLQYVKKASKRHVEEISEEDHLFSIDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQISRAFDNAYDDLLKAFSERNKFGNLPYGFRSNTWLVPPVAAQSPSFFPPLPVEDENWGGNGGGLGRDGEYDLIPWASKFSFIASMPCKTAEERQARDRKAFLLHSLFVDVAIFRAIKAVKHVLEDPSYRCLVAENDIYSERVGDLSVRVLKDGSVASCKIDSKIDGVEATGVNQKDLVERNLLKGITADENTAAHDSTTLGVVYVRYCGYVVVVKVEGEVDEKVKVNTLSHQNNELFDQPEGGANALNINSLRFLLHTTALPENNKQMTEIQLSESEELGGDTDTFVENLIKKSLAKLEEEELTSDYFVRWELGACWVQHLQDQNNTEKDKKPSLEKANNEIKVEGLGKPLKALKNNKKKSDSSNPNFESEHSKSNLEAENAALSSSECQHEAAAAENELVLKQMLSEAAFTRLKESGTGLHCKSIQDLIDLSQKYYMDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILRAVISAVVDKEKMASSIAGALNLLLGVPENRETDKSCDVHPLVWKWLELFLKKRFDWDLNRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFQKTDIVSLVAVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHKALKCNQKLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNHDTKGRDAAAKRRNQVRAISYQNNVSASSDESSKEIQKEASDEELHIPETGGSADSENETNSAPDPELPILEKISDEKPQTSNDLLSEVHPDGDDGWQSVQRPRSAGSYGRRVKQRRATLGKVYSYQKNVEVGTEQHPSVKSATQNSKYYFLKKRTTHHGGYADNRAVNISQGTKFGRKAVKAVAYRVKSTPSASKTIVNETPEIGDKEPDSVDVNPVKTPIVSLGKSPSYKEVALAPPGTISKLQVYNPQSEIPISHECDVGKHKEEDIEAHRNINPTPKGANNAFKEKSDDSLSDSIEDSQDDTVVSTEMKEETQLNKVVQDNCVTSEGLESGDVEAQGAVDNSIVIDGVENVVDSYTQELITSNLPCSFEPSDNINSSPRGSEDLGLNLLSPSQSQAGGISYKKLSASAAPFNPSPAIARAAPIAMNMTHPSGPGPVPGIGPWPVNMNVHPGPGTVLPAVNPMCSSPHHAYPSPPTTPNMMQPLPFMYPPYTQPQSIQTSSAFHANHFTWQCNLNPVISKFGPGAVWTGCHPVEFPRPVPIVESIPDIISEPQVHSYTVESPSSASVLLEDIDKLGDSNKEVKTSAPEINEDGTVRVDLESIKENGNLNFSATNTAGNEPNQNVGSNNSTNSSEMNMDDEKTFSILIRGRRNRKQTLRMPISLLTRPHGSQSFKVIYNRVVRGNDSPRSINFSSSKHCTASA* 1832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1447 1831 Gene3D Tetratricopeptide repeat domain 982 1111 IPR011990 GO:0005515
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 1399 1432 - -
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 1214 1240 - -
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 1146 1189 - -
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 129 153 - -
Tpr5g1447 1831 Pfam Translation initiation factor eIF3 subunit 135 696 838 IPR033646 -
Tpr5g1447 1831 SUPERFAMILY Hypothetical protein c14orf129, hspc210 175 263 IPR023231 -
Tpr5g1447 1831 SUPERFAMILY TPR-like 875 980 IPR011990 GO:0005515
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 1741 1766 - -
Tpr5g1447 1831 ProSiteProfiles Clueless (Clu) domain profile. 295 574 IPR025697 -
Tpr5g1447 1831 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1813 - -
Tpr5g1447 1831 Gene3D Tetratricopeptide repeat domain 868 981 IPR011990 GO:0005515
Tpr5g1447 1831 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1813 IPR027523 GO:0006996
Tpr5g1447 1831 CDD CLU-central 698 839 IPR033646 -
Tpr5g1447 1831 Pfam Tetratricopeptide repeat 992 1066 - -
Tpr5g1447 1831 Pfam Tetratricopeptide repeat 908 978 - -
Tpr5g1447 1831 SMART tpr_5 993 1026 IPR019734 GO:0005515
Tpr5g1447 1831 SMART tpr_5 909 942 IPR019734 GO:0005515
Tpr5g1447 1831 SMART tpr_5 951 984 IPR019734 GO:0005515
Tpr5g1447 1831 ProSiteProfiles TPR repeat profile. 909 942 IPR019734 GO:0005515
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 610 631 - -
Tpr5g1447 1831 Pfam Mitochondrial function, CLU-N-term 46 116 IPR028275 -
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 1158 1176 - -
Tpr5g1447 1831 MobiDBLite consensus disorder prediction 595 631 - -
Tpr5g1447 1831 SUPERFAMILY TPR-like 946 1073 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1447 Tpr-Chr5 27639817 27654634 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1447 K03255 - gmx:100808136 2753.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1447 5 27639817 27654634 Tpr5g1447 5 27639817 27654634 ECH