Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1433 ATGAATAACGGTTGTGAACAATACAGTCCTATTGAAACACAATACATAAGGAGACATCACAGACATGATTTAAGGGACAATCAGTGTTCCTCTACACTTGTCAAACACATCAAAGCCCCTGTTCACCTTGTTTGGTCTTTGGTTAGAAGATTTGATCAGCCACAAAAATATAAACCATTTGTTAGCAGATGTATTATGCAAGGTGACCTTGGCATTGGAAGTGTTAGAGAAGTTAATGTTAAATCTGGTCTTCCAGCTACAACTAGTACTGAGAGATTGGAACAACTTGATGATGAAGAACACATTCTTGGTATTAGGATTGTTGGTGGTGACCATAGGCTAAGGAACTATTCTTCAATAATCACCGTCCATCCGGAGGTTATTGACGGAAGACCAGGTACCATGGTGATTGAATCATTTGTTGTGGACGTGCCTGAAGGAAACACGAAGGATGAAACTTGTTACTTTGTGGAGGCGTTAATCAGGTGCAACCTAAGTTCTTTAGCCGATGTCTCGGAGAGGATGGCTGTGCAGGGTCGAACCGATCCTATTCCTATTAATATCAACCCATAA 573 0.4084 MNNGCEQYSPIETQYIRRHHRHDLRDNQCSSTLVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPEGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPIPININP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1433 190 CDD PYR_PYL_RCAR_like 29 173 - -
Tpr5g1433 190 Gene3D - 3 182 IPR023393 -
Tpr5g1433 190 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 9 183 - -
Tpr5g1433 190 SUPERFAMILY Bet v1-like 29 170 - -
Tpr5g1433 190 Pfam Polyketide cyclase / dehydrase and lipid transport 29 173 IPR019587 -
Tpr5g1433 190 PANTHER - 9 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1433 Tpr-Chr5 27365514 27367966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1433 K14496 - gmx:100500065 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1433 5 27365514 27367966 Tpr5g1433 5 27365514 27367966 ECH