Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1402 ATGAAGGCACCTCTGCAGCTCCTCTTCATAATTACCTTTCTCGGTTCATTCCTCCGTGCAAGGCCAGAAACCGACTCTTGTACCAGCAATCTGAACCTCAAAGCTCCAACCCCTTTTGATACAACCAACCTCCACTGTCTTTCTGTATGGGATGCTCAAGGTTTCATCCTCAGGTATGTTCAGACTTCTACAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCTTACATAGCTATTGGATTTTCGGCCAGCGGCAGCATGGTAGGTTCAAGTGCAATTGTGGGGTGGGTGGCATCCAGAGGAGCTAGTGGAGGGATAAAGCAGTATTATCTCGGTGGGGTTACCGCAAATCAGTTAGAAACTACTGAACCTTTGTCCTGGTTGATACTTGCCACTGGATCCACTGGTTTATTCCCCGCAGCACCAAATTATTCGCTAACAAAACACCTAGACAAGTTTTCCACAAGAATAGACTACTCAAAAGCAAACAATGGAAGTTCACAAGTGAATGGAAATTCTTCTTCACAAGGAGATGGAAATAGTTCACAAGGTGATTCATGTGACTCCAAGCTAAATCTCAGTATTCCTCTCAACTTTGACATAACCAAGCTCAATTGCCTTTCTGTTTGGAATGCTCAAGGATACATTCTTAGATATTCTCAAACTTCTTCAAACATATGGAGCTTCATTCTCTCAGCTCCAAACCAAAATTCTTATATATCAATAGGGTTCTCTCCTAATGGAGGCATGGTAGGTTCAAGTGCAATTGTAGGGTGGATTTCATCCAATGGAGCTATTGGAGGCATGAAACAATATTATCTAGCAGGGTATGCACCAAATCAAGTGGTTCCAGATAGAGGCAACTTAGCAATTATTAACAATTCAACTTTGATCACATCACAATCGTCGCGTTTATACATGGTTTTCCAGCTACAAACTAATCAACCTTTATCGCGGTTGATCTATGCCGTCGGACCTAATGGAGTCTTCCCTACAGTTCCAAGTTTTGCTCTAATGCAGCACCAAGACAAAGTTTCTGTAACTGTTAATTATGCCACAGGTTCAAGTGTATTAGGAAACTCATATGTGAACCTAAAAAGAAGCCATGGAGTGTTAAATATATTGGGATGGGGTATATTTATCATAATGGGAGCAATAGTTGCTCGTTATTTCAAGGATTGGGATCAATTTTGGTTTAATTTCCATGCTTCAGTTCAATCATTGGGCTTTATACTTGGATTAATAGGTGTAATTACTGGGCTTATTCTCAATAATCAACTCAATGTTGATTTTAATCTTCACAAGGCTCTTGGAATCATCATTCTTGTTCTTGCTTGCCTCCAGGTAATGGCTTTTGTTGCTCGACCAAAAAAGGAATCAAAAGTGAGAAAGCATTGGAATTTATATCATCATAACATAGGGAGAATAGTAATTATATTAGCCATAGCCAACATTTTCTATGGAATCCATTTAGGCAAAGAAGGAAGTCAATGGATGGTAGCTTATGGAATTGTGCTTGCAATATTGCTCTCTATTGCAGTAATTTTTGAGATTGGACTGTGGAGTAAAGACTAA 1584 0.3971 MKAPLQLLFIITFLGSFLRARPETDSCTSNLNLKAPTPFDTTNLHCLSVWDAQGFILRYVQTSTNIWSFILSTPDTNSYIAIGFSASGSMVGSSAIVGWVASRGASGGIKQYYLGGVTANQLETTEPLSWLILATGSTGLFPAAPNYSLTKHLDKFSTRIDYSKANNGSSQVNGNSSSQGDGNSSQGDSCDSKLNLSIPLNFDITKLNCLSVWNAQGYILRYSQTSSNIWSFILSAPNQNSYISIGFSPNGGMVGSSAIVGWISSNGAIGGMKQYYLAGYAPNQVVPDRGNLAIINNSTLITSQSSRLYMVFQLQTNQPLSRLIYAVGPNGVFPTVPSFALMQHQDKVSVTVNYATGSSVLGNSYVNLKRSHGVLNILGWGIFIIMGAIVARYFKDWDQFWFNFHASVQSLGFILGLIGVITGLILNNQLNVDFNLHKALGIIILVLACLQVMAFVARPKKESKVRKHWNLYHHNIGRIVIILAIANIFYGIHLGKEGSQWMVAYGIVLAILLSIAVIFEIGLWSKD* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1402 527 ProSiteProfiles DOMON domain profile. 216 328 IPR005018 -
Tpr5g1402 527 SMART 561_7 371 492 IPR006593 -
Tpr5g1402 527 MobiDBLite consensus disorder prediction 167 188 - -
Tpr5g1402 527 CDD DOMON_DOH 208 349 IPR045266 -
Tpr5g1402 527 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Tpr5g1402 527 CDD Cyt_b561_FRRS1_like 349 521 - -
Tpr5g1402 527 Gene3D - 347 525 - -
Tpr5g1402 527 SMART DOMON_3 242 328 IPR005018 -
Tpr5g1402 527 SMART DOMON_3 79 217 IPR005018 -
Tpr5g1402 527 Pfam Eukaryotic cytochrome b561 372 492 IPR006593 -
Tpr5g1402 527 PANTHER BNAC01G39800D PROTEIN 119 170 - -
Tpr5g1402 527 PANTHER BNAC01G39800D PROTEIN 184 526 - -
Tpr5g1402 527 PANTHER BNAC01G39800D PROTEIN 11 121 - -
Tpr5g1402 527 CDD DOMON_DOH 45 116 IPR045266 -
Tpr5g1402 527 ProSiteProfiles Cytochrome b561 domain profile. 336 527 IPR006593 -
Tpr5g1402 527 Pfam DOMON domain 219 285 - -
Tpr5g1402 527 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 119 170 - -
Tpr5g1402 527 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 121 - -
Tpr5g1402 527 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 184 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1402 Tpr-Chr5 27010100 27016535 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1402 - - lang:109356980 794.267