Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1401 ATGACAATAATTCAAACAAGTTCATCAATCCTTGTGACATGTCAAGATTCATGTGCCTCTAATTTGGTGGAACTTCAGCAACCAATTCCTTTTGATACAAAATCACTTCTTTGCAGTCCTGTTTGGCCTGATCACAATTTCATCCTCAGATATACCAAGGCTTCATCAGATGTATGGAGCTTTATATTCTCATTCCCAACAAACATAAAAGCATATGCAGCTATAGGGTACTCAAAAGATGGTAACATGGTTGGTTCTACAGCAATTGTAGGGTGGATGCCCTCTCCAGGGGCAGGAGGAATGAAAATGTACTCTCTTGATGGAAAATCAGCAAAAGATGTGATTCCTGACAAAGGAGAACTTTATATGATGAATGCTTCCATAGTTCCAGCTAGCACTTCATTAGGTTACATGATTTTCCAATTGAAAGCTACACAACTTACTACAAAATTGTTATTTGCCATTGGACCAAATGGTGTATTTCCTAATTATCCAGATTATGCCTTGTCCAAACATAGTGGTCAAATATCATTGGTCATTGATTATTCAAAAGGTACAATTAGAGAAGTTTCTAATCTAAAACTTAGAAGAAGCCATGGCATCCTAAACATTGCATCATGGAGCATTCTAATGATAATAGGATCCATAATTGCACGTTATTTCAAGCAATGGGATCCCATTTGGTTTTATTTGCATGCTTCTATTCAAATATTTGGATTTCTAGCTGGCATAGTTGGAATATTTTGTGGACTTGTCTTGTCTAAGAAACTTGATTCTAAAGTAACTCATCACAAGAATATAGCAATTCTCATTATCGTTCTTGGATGCCTCCAGGTATTGGCCATTAAATTACGACCAGGAAAAGATTCAAGGATACGTAAATATTGGAATTGGTACCATTATAACATTGGAAGAATTTTGATTTGCTTTGCAGTGGCTAACACATTTTATGGACTCCATTTAGGAGGTGAAGGATCTAAGTGGTTTCTTGCTTATGGAGTTTCAATTGCAATCTTAGTTATTTTTGCTTTCATTTTGGAGATAAGAAAATGGATTATTGTTAGAAAAGAGACTAACTCCACAAAGATTCCATCTTTTCCTCAATCCAATGTGGAGTTAGCTTACTAA 1128 0.3564 MTIIQTSSSILVTCQDSCASNLVELQQPIPFDTKSLLCSPVWPDHNFILRYTKASSDVWSFIFSFPTNIKAYAAIGYSKDGNMVGSTAIVGWMPSPGAGGMKMYSLDGKSAKDVIPDKGELYMMNASIVPASTSLGYMIFQLKATQLTTKLLFAIGPNGVFPNYPDYALSKHSGQISLVIDYSKGTIREVSNLKLRRSHGILNIASWSILMIIGSIIARYFKQWDPIWFYLHASIQIFGFLAGIVGIFCGLVLSKKLDSKVTHHKNIAILIIVLGCLQVLAIKLRPGKDSRIRKYWNWYHYNIGRILICFAVANTFYGLHLGGEGSKWFLAYGVSIAILVIFAFILEIRKWIIVRKETNSTKIPSFPQSNVELAY* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1401 375 ProSiteProfiles Cytochrome b561 domain profile. 163 355 IPR006593 -
Tpr5g1401 375 CDD DOMON_DOH 43 122 IPR045266 -
Tpr5g1401 375 Gene3D - 175 360 - -
Tpr5g1401 375 PANTHER BNAC01G39800D PROTEIN 11 352 - -
Tpr5g1401 375 CDD Cyt_b561_FRRS1_like 194 348 - -
Tpr5g1401 375 ProSiteProfiles DOMON domain profile. 45 156 IPR005018 -
Tpr5g1401 375 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 352 - -
Tpr5g1401 375 SMART 561_7 198 319 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1401 Tpr-Chr5 27001795 27005200 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1401 - - aprc:113851090 563.533