Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1384 ATGAAGGATTTGAATTCCGATCTCTTTGACCCTGTCACCGTCATGGAATCCGAATGGGCTCACGGTGGTGGTTCAACTTCCGATGCCGATTTCGGATTCGCTTTCAATGACAGTAATTTCTCCGATAGGGTTCTTCGTATCGAGATCATGCCTGACCCTGTTGATCCTCAGCCTGATTCTGAACTTTGTACCACCATCGCTGATTGGGCTCGACATCGGAAGAGGAGACGCGAAGATGTTAAGAAAGAAAACGGTGTGGATATGCCGGATGAGCAAATTTTGAATGGGAACCAACCTGAGATGGATGATTTTGTGGCTTCTGAAAATCAGGATGAAGAGGTCGTTGCCATGGTTGAAGAGTTTCCTTCTGGTGATGAAGCTGTTAATACCAATGATGATCCAAACCTGGGCATGGATTTCTCTGAAGCTGATGTTAGAGTTAAAACCCTACATATAAGTTCTCCTATTTTGGCCGCAAAAAGCCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAGGGAATCAGAGCTGAGACATGTCACCCTGAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAGCTACTGAATTTTATGTATAGCAATAACTTGAGCGTTAGGACCGCACCTGGTTTGCTTGATGTGTTGATGGCTGCAGATAAATTTGAAGTTGCTTCATGCATGAGATTATGTAGTCGGTTGTTGCGGAATTTGACCATGACACCTGAATCTGCATTGCTTTACCTGGAGCTTCCTTCCAGTGTCTTAATGGCTGACGCAGTTCAACCATTGACCGATGCTGCAAAGCAGTATCTTGCTGGCCGATACAAAGATATAACCAAGTTCCAGGAAGAGGTTATGAACTTGCCCTTAGCTGGAATAGAGGCAATATTATCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGACTTTGTGTTGAAATGGGCAAGACACCAGTACAGCAATCTTGAAGAAAGGCGAGAAGTTCTAGGTGCACGGCTTGCACGATTAATTCGCTTCCCTTATATGACTTGCCGAAAGCTTAAGAAGGTCTTAACCTGTAGTGATTTTGAACATGATGTTTCATCCAAGCTTGTACTTGAAGCCCTATTCTTCAAGGCAGAGGTTCCACATCGCCAACGGTCACTAGCAGCAGAAGAGCCTGCTTTCTCAAGCCGTCGTTTCTTGGAGAGGGCATACAAATACCGTCCTGTCAAGGTGGTTGAATTTGAACTTCCCCGCCAGCAGTGTGTGGTGTACTTGGATCTAAAGCGTGAAGAGTGTTCCAATTTGTACCCATCTGGCCGTGTTTATTCTCAGGCATTCCACTTGGGTGGACAGGGATTTTTCCTTTCGGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGTCTGTTTCTAGGAATGCAGGAAAAGGGTTCCGTCAGCTTCACCGTGGACTATGAATTTGCTGCAAGGTCAAGACCAACAGAGGAGTTTGTCAGCAAATACAAAGGCAATTACACATTCACAGGTGGCAAGGCCGTTGGCTACAGAAACTTGTTTGCAATTCCATGGACTTCATTCATGGCTGAGGATTGTCTTTACTTCATCAACGGTGTTCTACATCTCAGGGCTGAGCTCACCATCAGACATTCAAATTTGTAA 1665 0.4468 MKDLNSDLFDPVTVMESEWAHGGGSTSDADFGFAFNDSNFSDRVLRIEIMPDPVDPQPDSELCTTIADWARHRKRRREDVKKENGVDMPDEQILNGNQPEMDDFVASENQDEEVVAMVEEFPSGDEAVNTNDDPNLGMDFSEADVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNNLSVRTAPGLLDVLMAADKFEVASCMRLCSRLLRNLTMTPESALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMNLPLAGIEAILSSDDLQVASEDAVYDFVLKWARHQYSNLEERREVLGARLARLIRFPYMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQRSLAAEEPAFSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLYPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRHSNL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1384 554 SMART BTB_4 112 239 IPR000210 GO:0005515
Tpr5g1384 554 Pfam BTB/POZ domain 148 236 IPR000210 GO:0005515
Tpr5g1384 554 Gene3D - 271 377 - -
Tpr5g1384 554 Gene3D Potassium Channel Kv1.1; Chain A 137 258 IPR011333 -
Tpr5g1384 554 Pfam BTB And C-terminal Kelch 262 354 IPR011705 -
Tpr5g1384 554 SUPERFAMILY POZ domain 149 236 IPR011333 -
Tpr5g1384 554 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 551 - -
Tpr5g1384 554 MobiDBLite consensus disorder prediction 76 98 - -
Tpr5g1384 554 ProSiteProfiles BTB domain profile. 132 208 IPR000210 GO:0005515
Tpr5g1384 554 CDD BTB_POZ_ZBTB_KLHL-like 143 222 - -
Tpr5g1384 554 SMART BACK_2 254 356 IPR011705 -
Tpr5g1384 554 PANTHER OS02G0260700 PROTEIN 6 551 IPR045890 -
Tpr5g1384 554 SUPERFAMILY TRAF domain-like 438 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1384 Tpr-Chr5 26792104 26795932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1384 - - gmx:100817612 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1384 5 26792104 26795932 Tpr5g1384 5 26792104 26795932 ECH