Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1380 ATGGCTGATGAAACATCATGGATCAGCCACTATGATGATGACACAAGAAAGGAGACTCAGGACATTGATTCATTATCTGAACCGGGCGAGGAAGTTGATAAAGATGGGACTGTTATTTCGCTTGATATAATGACTGACGATTTATTGGACCGTATCCTAGCGTATCTCCCGGTTGAAAGCATTTTCAGAGCAAGCAGTGTGAGTAAAAGATGGTTTTCAATTGTTACTTCTGAAAGCTTTTCATGGAACCCTTCCAATTCGCCACCACAGAAGCCTTGGTACTTTATGTTTACCAGCTCCGATGAACCAACTGGTTGTGCTTATGATCCGAACCTTCGGAAATGGTATTGCATTGAACTTCCCTTTATTGGAACTTCTAATTGGATCATTTCTTCATCGTATGGCTTAGTTTGCTTCATGGACAGCAGTCGCGTATTATACATGTGCAATCCAATTACCAAAAGATGTAAGAAGCTTCAAGAGCCTTATGGGTTGAGATTTTCCGATTATGGTGCATTAGCAATGTCTGTAGACAAGGAATCCCACAGTTATATCTTGGCAATTGTGAAATCAAAGCAAGTTCCTGAAAACTTTTCCCAATGGGATATCTCGATTCATGTTTACAAATCAGAGGAGGAAACCTGGGCAACGCCGCTAACTGAGGTTTTGATCGGGTGGAGAGGTGGAGAGGAGAGTGTGATATGCAATGGTGTGCTGTATTTTCTAGTTTACTTCACTGGTGGTGTTCCTTCAGAAAGCCGTCACGCGTTAGTCGCATATAATGTTTCTGGCCGTGCTTCTCAAGCTAGCTTGAGAAGGAGCTTTATTTCTGTACCTTGTTCTCTAACATGCGGCCGTCTAATGAATATGAAGGAGAAGCTTGTAATGGTGGGAGGAATTGGCAAACACGATCGACCAGACATAATCAAAGGAATTGGTATATGGGTTCTTCACGATAGGAAGTGGGAAGAGATTGTCCGAATGCCGCACAAATACTTCCAAGGCTTTGGAGAATTTGACGAGGTTTTCGCTAGCAGCGGAAAAGATGATCTAATCTATATTCAAAGTTATGGATCTCCTGCACTTCTCACATTTGACATGAAGGTTAAACAATGGAAATGGTCACAGAAATGTCCGGTAACAAAAAGGTTCCCTCTACAGCTTTTCTCTGGTTTTTGCTTTGAGCCTAGGCTTAAAATTGCTCCATAG 1209 0.4202 MADETSWISHYDDDTRKETQDIDSLSEPGEEVDKDGTVISLDIMTDDLLDRILAYLPVESIFRASSVSKRWFSIVTSESFSWNPSNSPPQKPWYFMFTSSDEPTGCAYDPNLRKWYCIELPFIGTSNWIISSSYGLVCFMDSSRVLYMCNPITKRCKKLQEPYGLRFSDYGALAMSVDKESHSYILAIVKSKQVPENFSQWDISIHVYKSEEETWATPLTEVLIGWRGGEESVICNGVLYFLVYFTGGVPSESRHALVAYNVSGRASQASLRRSFISVPCSLTCGRLMNMKEKLVMVGGIGKHDRPDIIKGIGIWVLHDRKWEEIVRMPHKYFQGFGEFDEVFASSGKDDLIYIQSYGSPALLTFDMKVKQWKWSQKCPVTKRFPLQLFSGFCFEPRLKIAP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1380 402 Pfam F-box domain 46 80 IPR001810 GO:0005515
Tpr5g1380 402 PANTHER F-BOX FAMILY PROTEIN 2 401 IPR045048 -
Tpr5g1380 402 TIGRFAM F_box_assoc_1: F-box protein interaction domain 134 360 IPR017451 -
Tpr5g1380 402 SUPERFAMILY Galactose oxidase, central domain 105 380 IPR011043 -
Tpr5g1380 402 MobiDBLite consensus disorder prediction 1 31 - -
Tpr5g1380 402 Gene3D - 37 83 - -
Tpr5g1380 402 PANTHER OS02G0260200 PROTEIN 2 401 - -
Tpr5g1380 402 SMART fbox_2 44 84 IPR001810 GO:0005515
Tpr5g1380 402 SUPERFAMILY F-box domain 42 143 IPR036047 GO:0005515
Tpr5g1380 402 ProSiteProfiles F-box domain profile. 38 85 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1380 Tpr-Chr5 26716473 26719640 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1380 - - gmx:100817678 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1380 5 26716473 26719640 Tpr5g1380 5 26716473 26719640 ECH