Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1375 ATGGGTTCTTTGGAATCAACGATCCCATTGAAGAAAGGGAGTTTATTTGGTACTATTCATAATTCAAGTAAAAAAGAGAAACACCCATTTTCACAAAGGTTTAGATCGAGTTTTTCTCGTTTGTTGTTCAAGAAACTAGATTATGTTCAATGGATTTGTGCTGTTCTTGTGTTTCTTTTTCTTGTTGTTGTGTTTCAAATGTTTCTTCCTGTCTCGGTTGTGGAACATTCAGCTGTGAAGATGAATTCTTGGAACAATTTACCTAAAAGAGAGAGGTTTGTGTTGGACATTGGTGAGGAGGAAGCTGTTTTTTTGTCTAGGATTTCGGACAAGTTTAAGGATTTGAATCAGTTTAACCGAACGGGGACGCGGGTTGGTTACAGGAATCCTCAGTTGGCATTGGTATTTGGAGAATTATTGGTTGATTCACAACAATTGTTAATGGTAACAATTGCCACCGCTTTGTTAGAGATTGGCTACAGAATTCAGGTATTTTCACTTGAAGATGGACCGGGGCGTAATATGTGGAGAAATTTAAGAGTTCCCATCACTATTATTCATAATCATAACAAGCCAGACAAAACTGTAGACTGGCTAAACTACGACGGTATAATTGTGAGCTCTCTTGAAGCCAGAAATGCCTTTTCTTGTTTTTTGCAGGAACCATTCAAGTCTGTACCACTTATATGGATAATTCATGACAGTGCTCTTGGTTACCGTTCAAGACAATATACTGCTGCTGGGCAGATTGAACTTTTTAATGATTGGAGAAAAGTTTTCAATCGTTCATCTGTTGTTGTCTTTCCAAACTATGCCTTGCCGATGATCTACTCCACATTTGATACTGGAAATTTTTACGTCATTCCTGGTTCCCCTGCTGAAGCGTTGGAAGCAGATGCATTTATGGCATTGCAGAAAGATAAATTGCGCATCAGTATGGGCTACAGTCCAGAAGATGTCATTATCGCAATTGTCGGCAGTCAATTTTTGTACAAGGGCATGTGGTTGGGGCATGCTGTTGTGTTGCAGGCTTTATCACCACTTTTGGCAGACTTCCCTTTAAGCAAAGATAATACAACTGCACAACTACGGATCATTGTTCATAGTGGAGAGTTGACAAATAACTACACTGTTGCTCTTGAGACGATGGCACGAAGCTTGAAATATCCAAAAGGGACCATAGAGCTTATAGCTGGAGATTTGAATTCAGAGTCTGTTCTTGGCACGGCAGATGTTGTGATATATGGATCCTTGCTTGAAGAACAATCTTTTCCAGAGATTTTGATTAAAGCCATGTGCTTTGAGAAACCAATTATTGCTCCTGATATTTCTATGATCAGAAAATATGTTGATGACAGGGTAAACGGCTATCTTTTCCCAAAGGATAATATTAGAGTTCTTAGAAAAATCATGTTAGAGGTGATCTCAAAAGGGAAAATATCACCGCTGGCTCGGAACATTGCCTCAATGGGGAGAAGAACTGCTAAGAACATTATGGCTTCCGAAGCAATTGATGGATATGCAACTTTACTTCAGAATATTCTCAAGCTTCCATCAGAGGTTGTTCCTCCTAAGGCTGTTTCAGAAATATCCCCTCATGTTAAAGAAAAGTGGCAGTGGCATTTGCTTGAAGCAGTTCCAAATTCGACCTATCAAAATAGGGTATTGAGAAGCAACACATTTTTAGATAAATACGAAGACCGTTGGAATCGTTCACGAAAAGATAGATCGTCTACTGATGTTACTGATAATGACTCATTTGTATATATGATATGGGAAGACGAAAAACATATTCAGATGGCTATTACCAAAAAAAGGATAGAGGATGAGGAGTTGAAGGATAGAACGGAGCAGTCACACGGAACATGGGAGGAAGTATATCGAAATGCGAAGAAAGCTGATAGGTTAAAGAATGATTTGCACGAAAGAGATGATGGAGAACTTGAGCGGACTGGACAACCACTTTGCATTTATGAACCGTACTTCGGAGAAGGATCCTGGCCTTTTCTACATCAAAGATCTCTTTATCGCGGAGTTTCCCTGTCCAGCAAAGGTAAAAGGCCCGGGAAAGATGATTTTGATGCCCCTTCTCGTCTTCCATTGCTTAACAGTGCTTACTATCGAGATGTCCTTGGTGACTTTGGATCCTTCTTTGCCATTGCAAACCGGATTGATCGTTTACACAGAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCAAGGAAGGCTTCTTTGTCCAGAGCTGCTGAAAATGCATTATTAGACGCCATTCAATCCAAAAGGGATGGGGATGCACTATATTTCTGGGTGCGGATGGATACGGATCCGCGAAACCCTTCACAGAAGGACTTCTGGTCATTTTGCGATGCCATTAATGCAGGAGGTTGCAAACCTGCTTTCTCAGAAGCAATGAGGACAATGTATGGATTAAAGGATGACGTGGATGCTTTGCCACCCATGCCCGTAGACAGTGACACTTGGTCTGTCATGTCGAGTTGGGCTCTACCCACAAGATCCTTTTTAGAGTTTGTGATGTTCTCCAGAATGTTCGTCGATGCATTGGATGCGCAAATGTACGAGGAGCACCATTTGACTGGACACTGTCCTTTGAGTTTTTCAAAGGATAAGCATTGTTATTCAAGGGTTCTTGAACTTCTTGTAAACGTGTGGGCCTACCACAGCGCAAGGAGGATGGTATTCGTAAACCCCGAAACCGGTCTAATGCAGGAACAACACAATTTCAAGAACCGTAGAGGACAAATGCGGATCAACTGGTTCTCGTACAACACACTCAAGAACATGGACGAGGACTTAGCAGAGTTATCAGATTCCGAGGATCCTAATAGACACTGGTTGTGGCCATCAACTGGTGAAATTTTTTGGCAAGGTTTATATGAGAGGGAAAGAAGTTTAAGGCACAAGGAGAAAGAAAAGAGGAAGCAAAAGAGTTTAGAAAAATTGAATAGAATGCGGAAGCGACATCGACAACAAGTAATCGGGAAATATGTTAAGCCTCCACCAGATATGGAAGAAAGTTCTAACTCATCTTTGCTTGCAGTATAA 3069 0.4096 MGSLESTIPLKKGSLFGTIHNSSKKEKHPFSQRFRSSFSRLLFKKLDYVQWICAVLVFLFLVVVFQMFLPVSVVEHSAVKMNSWNNLPKRERFVLDIGEEEAVFLSRISDKFKDLNQFNRTGTRVGYRNPQLALVFGELLVDSQQLLMVTIATALLEIGYRIQVFSLEDGPGRNMWRNLRVPITIIHNHNKPDKTVDWLNYDGIIVSSLEARNAFSCFLQEPFKSVPLIWIIHDSALGYRSRQYTAAGQIELFNDWRKVFNRSSVVVFPNYALPMIYSTFDTGNFYVIPGSPAEALEADAFMALQKDKLRISMGYSPEDVIIAIVGSQFLYKGMWLGHAVVLQALSPLLADFPLSKDNTTAQLRIIVHSGELTNNYTVALETMARSLKYPKGTIELIAGDLNSESVLGTADVVIYGSLLEEQSFPEILIKAMCFEKPIIAPDISMIRKYVDDRVNGYLFPKDNIRVLRKIMLEVISKGKISPLARNIASMGRRTAKNIMASEAIDGYATLLQNILKLPSEVVPPKAVSEISPHVKEKWQWHLLEAVPNSTYQNRVLRSNTFLDKYEDRWNRSRKDRSSTDVTDNDSFVYMIWEDEKHIQMAITKKRIEDEELKDRTEQSHGTWEEVYRNAKKADRLKNDLHERDDGELERTGQPLCIYEPYFGEGSWPFLHQRSLYRGVSLSSKGKRPGKDDFDAPSRLPLLNSAYYRDVLGDFGSFFAIANRIDRLHRNAWIGFQSWRATARKASLSRAAENALLDAIQSKRDGDALYFWVRMDTDPRNPSQKDFWSFCDAINAGGCKPAFSEAMRTMYGLKDDVDALPPMPVDSDTWSVMSSWALPTRSFLEFVMFSRMFVDALDAQMYEEHHLTGHCPLSFSKDKHCYSRVLELLVNVWAYHSARRMVFVNPETGLMQEQHNFKNRRGQMRINWFSYNTLKNMDEDLAELSDSEDPNRHWLWPSTGEIFWQGLYERERSLRHKEKEKRKQKSLEKLNRMRKRHRQQVIGKYVKPPPDMEESSNSSLLAV* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1375 1022 CDD GT4_PimA-like 148 512 - -
Tpr5g1375 1022 Pfam Glycosyl transferases group 1 370 487 IPR001296 GO:0016757
Tpr5g1375 1022 MobiDBLite consensus disorder prediction 974 1022 - -
Tpr5g1375 1022 Coils Coil 975 999 - -
Tpr5g1375 1022 MobiDBLite consensus disorder prediction 987 1001 - -
Tpr5g1375 1022 Gene3D Glycogen Phosphorylase B; 297 497 - -
Tpr5g1375 1022 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1016 - -
Tpr5g1375 1022 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1016 - -
Tpr5g1375 1022 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 144 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1375 Tpr-Chr5 26592921 26600010 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1375 - - gmx:100806723 1631.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1375 5 26592921 26600010 Tpr5g1375 5 26592921 26600010 ECH