Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1367 ATGACAAAACAAAATGTTGATACAAAGATAAAAAGATGGAGAGGTGTTTATTTTTGCATTTTTATAGCTGGATCCATTGCTCTTCTTCTTTCTGGTGCATCCATGTCGAAATTCTTCTCTTTGAAATCATTTCTTGATGTTGAATCTTTTTACCCTCATCTAACTCCTTCTGAGGACACAAATAGGAATAATCAAAATGAAGTGTTAGCAACTGTGCAAATTGTGATTACGAAAATTCAGGAAGAACTTGAAAAACTTAGAGAAATACATCAAAATCCATCATCATCGTCGCTATCCTCGTCACAATCTGTGTTGAAACAAGGTGCTTTCCTTTCTGACATATTAGGACTACTCGAATCTCTGCATAGTGAAGATCAAAACGGTGGTTTTGTGGTTCATCCTTTGATGAAAGAAAAGAAACGATCTGACGAACCTGCTAATTACTTTTTGAGAGAAGAGATTCGAAAATATGTCAGAGTTAGGCCTAATAGATTAGGAAAACAAAATTTCATGGGAGCGAACGCAACATTCACTAGCATAGGACATGCATGTTTTTCCATGAAGGAAGATTTAGAAGAGTACATGGATTATGATATTGGTGAAATATGTAATGATGATTGGAAACTAGCTCAAAAGCTTATGGTTCATGGATGTGATCCTTTACCAAGAAGAAGGTGTTTTTCTCGAGCACCTAAGCTATACAATAAACCATTCCCTATCAAAGAATCCATGTGGAAATTACCTGATGATAGAAATGTTAGATGGAGTCAATATAGGTGCAAGAACTTTACTTGTCTCGCAAGCAACAACAACGCTCGAAAGGGATTCTTCAAGTGTGCGGATTGTTTCAATCTTACCGATCATGAGATGCCGAGATGGATAAGATTGGAAGGTGATTCAATTTCAAACCAAACAAGTGAAGCTGATTTTTTCATAGATGATGTTCTTGGAATTAAGTTAGGTGAGATTAGAATTGGATTGGATTTTAGTGTTGGAACAGGAACTTTTGCTGCAAGAATGAAAGATTTCAATGTGACTATAGTTTCAGCAACTATTAATTTTGGTGCACCTTTTAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTTTATTTAACTATAAATCAAAGGCTTCCATTTTTTGATAATACACTTGATTTGATTCATACAACAAGGTTTCTTGATGGTTGGATTGATTTTGTTCTTTTGGATTTTGTTTTGTATGATTGGGATAGAGTTTTGAGGCCAGGAGGGTTACTTTGGATTGATAGCTTTTTTTGCTTGAAGGAAGATTTGTATATTTATTTGGAGGCTTTCAAAATGTTGAGATATAAGAAGCATAAATGGATTGTTGTTCCAAAGATTGATAAGGATGATAAAGAGGTGTTCTTTTCTGCTGTTTTAGAGAAACCTTCTAGGCCATTTAGGTAA 1431 0.3494 MTKQNVDTKIKRWRGVYFCIFIAGSIALLLSGASMSKFFSLKSFLDVESFYPHLTPSEDTNRNNQNEVLATVQIVITKIQEELEKLREIHQNPSSSSLSSSQSVLKQGAFLSDILGLLESLHSEDQNGGFVVHPLMKEKKRSDEPANYFLREEIRKYVRVRPNRLGKQNFMGANATFTSIGHACFSMKEDLEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNKPFPIKESMWKLPDDRNVRWSQYRCKNFTCLASNNNARKGFFKCADCFNLTDHEMPRWIRLEGDSISNQTSEADFFIDDVLGIKLGEIRIGLDFSVGTGTFAARMKDFNVTIVSATINFGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLYIYLEAFKMLRYKKHKWIVVPKIDKDDKEVFFSAVLEKPSRPFR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1367 476 Coils Coil 69 89 - -
Tpr5g1367 476 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 6 475 - -
Tpr5g1367 476 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 305 448 IPR029063 -
Tpr5g1367 476 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 6 475 - -
Tpr5g1367 476 Gene3D Vaccinia Virus protein VP39 321 462 IPR029063 -
Tpr5g1367 476 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 318 422 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1367 Tpr-Chr5 26484261 26486169 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1367 - - gmx:100809058 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1367 5 26484261 26486169 Tpr5g1367 5 26484261 26486169 ECH