Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1365 ATGGCAGAAACTGATCAAGCAAAACCTCTAGCCTCAGTTAGAGTCCACCCAAGAAGTGATGATGAAGAAAAAGCTCTTAAAACAAAGAACCGTAGAAGAAAATTCAAGTTATGTGGATGTATAACAACAATTTTACTACTACTTTTAGTCATAGTAATTGTTATCTTAGTATTCACGGTTTTTAAGGTTAAAGATCCAAAAGTAACAACAAATGAGATCCAACTTACAAACTTTGATGTCAACGTTGGTCAACTTCTAACCGGTCAAATTAAGATCAACATAACAATGGTTGTAAACATGTCTATTAAGAATTCTAATAGAGCATCGTTTAGACTTGGCAATAGCACAACATCGGTATATTACCGGGGTATATCGGTTGCGGATGCACAAATACCGCCTGGAATTGTTATCAAGGCAAGGAAGACATCAGGGTTGAATGTTACGGTAGATGTTATGGCTGACCGTCTCGTTTCTAGTCCGGATTTGTTGGGAGATGTGCGTAACGGCGAGATGATCATGACCACTTACTCGGTAATTCCGGGGAGAGTTAAGATGTTGTTTATTAAAAAACATGTTGAGGTGAAAATGAATTGCACTATGACGATTAATATTTCAAAGAGAGGAATTGAAGACTTGATTTGTAAACGTAAGGTGAAACTTTAG 663 0.3695 MAETDQAKPLASVRVHPRSDDEEKALKTKNRRRKFKLCGCITTILLLLLVIVIVILVFTVFKVKDPKVTTNEIQLTNFDVNVGQLLTGQIKINITMVVNMSIKNSNRASFRLGNSTTSVYYRGISVADAQIPPGIVIKARKTSGLNVTVDVMADRLVSSPDLLGDVRNGEMIMTTYSVIPGRVKMLFIKKHVEVKMNCTMTINISKRGIEDLICKRKVKL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1365 220 MobiDBLite consensus disorder prediction 1 25 - -
Tpr5g1365 220 Pfam Late embryogenesis abundant protein 100 199 IPR004864 -
Tpr5g1365 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 219 - -
Tpr5g1365 220 SUPERFAMILY LEA14-like 47 159 - -
Tpr5g1365 220 Coils Coil 214 220 - -
Tpr5g1365 220 Gene3D - 52 208 - -
Tpr5g1365 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1365 Tpr-Chr5 26472567 26473607 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1365 - - adu:107472891 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1365 5 26472567 26473607 Tpr5g1365 5 26472567 26473607 ECH