Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1361 ATGTCATTTCTAAGGTCCATACTCCGAACAACAACCCTTCACCGTTCATCTCTTCAAAGACACATTCGTTCCATGAGCAATCTACCAGAAAACACAGTATATTCAGGACCAACACCACAAAACAAAAGAGTAACACTTTCACAACTTCGACAAAAACATCGAAACTCAATACCAATCACAATGGTCACTGCTTATGATTACCCTTCTGCTGTTCACCTTGATACAGCCTCCATTGATATATGTCTTGTTGGTGATTCTGCTTCCATGGTTGTTCATGGTCATGACACTACTTTACCTATTACTTTAGATGAAATGCTTGTTCATTGTCGTGCTGTTGCTCGTGGTGCTAAAACTCCTCTTCTTGTTGGTGATTTGCCTTTTGGAACTTATGAATGTAGTTCAAAACAGGCAGTGGACGCGGCAGTTCGGATTTTGAAAGAAGGAGGAATGGATGCCATAAAATTGGAAGGAGGCTCACCTTCAAGAATTGTTGCAGCAAAAGCTATTGTTGAAGCTGGAATAGCCGTGATTGGGCATGTTGGTCTTACTCCACAGGCTATTAGTGTTTTAGGTGGATTTAGGCCTCAAGGAAGGAATATTGCTAGTGCTGTCAAGGTTGTTGAGACGGCAATGGCTTTGCAGGAAGCAGGGTGTTTTGCTGTTGTTTTAGAATGTGTGCCTGCACCTGTGGCTGCCGCAGCAACAGCAGCGCTTCAAATTCCGACTATTGGAATCGGGGCTGGACCCTATTGCAGTGGACAGGTACTTGTTTATCATGATCTTCTTGGTATGTTACAGCACCCCCACCATGCAAAGGTTACTCCAAAATTTTGTAAACAATACGCTCGTGTCGGAGATGTCATCAACAAAGCCTTACTCGATTATAAGGAAGATGTGATAAATGGTTCATTTCCTGATGCTCAACACAGTCCATACAAAATCAGTGAAACTGATGCTAATGGTTTCTTAAATGAGCTGCAAAATTTAGGTTTTGACAAGGCAGCGTCTGCGGCGTCTGAAGCAGTTCAGAAGATGGTTACAAAATCAACAAAGTGA 1056 0.4252 MSFLRSILRTTTLHRSSLQRHIRSMSNLPENTVYSGPTPQNKRVTLSQLRQKHRNSIPITMVTAYDYPSAVHLDTASIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYECSSKQAVDAAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNIASAVKVVETAMALQEAGCFAVVLECVPAPVAAAATAALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLDYKEDVINGSFPDAQHSPYKISETDANGFLNELQNLGFDKAASAASEAVQKMVTKSTK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1361 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 21 347 IPR003700 GO:0003864|GO:0015940
Tpr5g1361 351 CDD KPHMT-like 46 305 IPR003700 GO:0003864|GO:0015940
Tpr5g1361 351 Pfam Ketopantoate hydroxymethyltransferase 43 306 IPR003700 GO:0003864|GO:0015940
Tpr5g1361 351 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 21 347 - -
Tpr5g1361 351 TIGRFAM panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 44 310 IPR003700 GO:0003864|GO:0015940
Tpr5g1361 351 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 43 309 IPR015813 GO:0003824
Tpr5g1361 351 Gene3D - 41 322 IPR040442 -
Tpr5g1361 351 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 44 311 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1361 Tpr-Chr5 26441336 26444296 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1361 K00606 - gmx:100808841 551.592