Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1325 ATGGCTCAAGAAAATGTGAAAAGGTCACCTTCTCAAATAAAATATGGCATGATTCAAATTACCATAAGGTTATTGGCTATATTATTGTTTCTGGGTTTGGTTTTCCTTTTCATTATGATGCCTACAACAACTTACAAACAAAAATGGATTCCTAAAGTTCAAGCAAAGACAAATAATTCCACCTATTTTGGTGCACAAGGTTTAAAGTTTATTCTGTATGCTTTACCAGTCTTTTTAATAGCTACTTTGGGATGTGTCTATCTTCACATAGCCAAAAAATCATATGAGTGCAACAATATAGACATTGGCAATGGAAAGAACCGTGAGACAACTATATGGAATCGTCCAATCCTTGTAAAAGGTCCACTTGGAATTGTTTCTAGCACAGAGATTGCATTTTTGCTTATGTTCATTGGACTTCTTGTTTGGTCCTTAGCAACTTGGTTACACAATGACTTTGCAAATATCACATCAGAACCACCTGAGGATGGCCAAAAAGTGTGGCAAGAGAAATTGGAAAGTGCGGGATTAAGGTTAGGGCTTGTTGGGAACATATGTTTGACGTTGTTGTTTTTTCCTGTGACTCGTGGTTCATCCGTGCTACCATTGTTTGGGCTCACTTCTGAAAGTTCCATAAAATACCATATTTGGATTGGACACGTGCTCATGACAATTTTTACTTCTCATGGAATTTGTTACATCATCTATTGGGCATCTACTAATCAAATTTCTGAGATGCTAAAATGGGAGAAAGTTGGAATATCAAATGTAGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTCCTATGGGTTGCAACCATTCCTAAAATTAGGAGAAAATTCTTTGAGCTTTTTTTCTACACTCATAATCTCTACATCATTTTCATGATCTTCTTCATCTTTCATGTTGGCATTTCCTATGCCTTCTATATGCTCCCCGGTTTCTACCTCTTCTTGGTTGACCGTTACCTACGGTTTTTGCAATCTAGACGAGAAGTTCGTTTGGTTTCATCTCGTGTTTTGCCGTGCGAAACCGTAGAACTCAACTTCGCCAAGGGACATGGGTTGAGTTATAATCCCACAAGTGTGATGTTCATAAATGTACCAAGCATATCAAAATTACAATGGCATCCATTTACCATTACATCTAATAGTAAATTGGAGCCAGAAAAGCTAAGTGTTGTCATCAAAAGTGAAGGACCTTGGACACAAAAGCTCTATCAGATACTTTCAAATCCTGCACCAATCGATCGCCTTGCTATATCCATTGAAGGTCCTTATGGACCTGCTTCAACCAATTACCTAAGGCATGACACACTTGTGATGGTGAGTGGAGGAAGTGGTATCACACCATTTATCTCAATCATTAGAGAGCTAATATATCTTAGCACCACATTTAAATGCAAAACACCAAACATTGTCTTAATTTGTTCATTCAAGAGTACTTCATATCTATCAATGCTAGATTTGATCCTACCAATTACTGGCACACCATCTGATATTTCTAATCTTCAAATACAAATTGAGGCATACATCACAAGAGACAAAGAGTTTAAATCTGATATTCCAATTCATCCTCAAACTTTATGGTTTAAGCCAAATCCAACAGATGCACCAATACATGCTATGTTAGGTCCAAACTCTTGGCTTTGGCTTGGTGCTATAATCTCATCATCGTTCATCATCTTCCTTATCATAATCGGGATCATTACTCGTTACTACATTTTCCCTATCGATCATAACACGAATAGAATATTCGCGTATCCGTTAAGGTCGTTCCTTAACATGCTAGTAATATGTGTGTCAATAGCTGTTGTTGCTAGTGTAGCAGTCCTTTTGAACAAGAAACAAAATGCCAAAGAAGCAAAACAGATTCAGAACTTGGAAGGGTCATCACCAACAGTATCACCAAATTCAACGATTTACAATGCAGATAGAGAATTGGAAAGTCTTCCATCTCAGTCTCTTGTTGAAGCTACCAATGTGCATTATGGAACTAGACCTGACTTGAGAAGACTTCTATTTGAAATCAAAGGGTCAAGTGTGGGAGTTCTTGTTTCAGGACCTAAAAATATGAGGCAGGAGGTTGCTGCCATTTGCTCATCTGGTTTAGTTGAAAATCTGCATTTTGAGTCTATAAGTTTTACCTGGTGA 2154 0.376 MAQENVKRSPSQIKYGMIQITIRLLAILLFLGLVFLFIMMPTTTYKQKWIPKVQAKTNNSTYFGAQGLKFILYALPVFLIATLGCVYLHIAKKSYECNNIDIGNGKNRETTIWNRPILVKGPLGIVSSTEIAFLLMFIGLLVWSLATWLHNDFANITSEPPEDGQKVWQEKLESAGLRLGLVGNICLTLLFFPVTRGSSVLPLFGLTSESSIKYHIWIGHVLMTIFTSHGICYIIYWASTNQISEMLKWEKVGISNVAGEISLLAGLFLWVATIPKIRRKFFELFFYTHNLYIIFMIFFIFHVGISYAFYMLPGFYLFLVDRYLRFLQSRREVRLVSSRVLPCETVELNFAKGHGLSYNPTSVMFINVPSISKLQWHPFTITSNSKLEPEKLSVVIKSEGPWTQKLYQILSNPAPIDRLAISIEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIYLSTTFKCKTPNIVLICSFKSTSYLSMLDLILPITGTPSDISNLQIQIEAYITRDKEFKSDIPIHPQTLWFKPNPTDAPIHAMLGPNSWLWLGAIISSSFIIFLIIIGIITRYYIFPIDHNTNRIFAYPLRSFLNMLVICVSIAVVASVAVLLNKKQNAKEAKQIQNLEGSSPTVSPNSTIYNADRELESLPSQSLVEATNVHYGTRPDLRRLLFEIKGSSVGVLVSGPKNMRQEVAAICSSGLVENLHFESISFTW* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1325 717 Pfam FAD-binding domain 333 431 IPR013112 GO:0016491
Tpr5g1325 717 PANTHER FERRIC REDUCTION OXIDASE 2 19 716 - -
Tpr5g1325 717 CDD NOX_Duox_like_FAD_NADP 339 514 - -
Tpr5g1325 717 Gene3D - 421 540 IPR039261 -
Tpr5g1325 717 SFLD Ferric Reductase Domain 40 717 - -
Tpr5g1325 717 PANTHER NADPH OXIDASE 19 716 - -
Tpr5g1325 717 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 328 433 IPR017927 GO:0016491
Tpr5g1325 717 Pfam Ferric reductase like transmembrane component 179 299 IPR013130 -
Tpr5g1325 717 Pfam Ferric reductase NAD binding domain 437 701 IPR013121 GO:0016491
Tpr5g1325 717 SFLD Ferric reductase subgroup (FRE) 18 717 - -
Tpr5g1325 717 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 421 492 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1325 Tpr-Chr5 25919984 25924744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1325 17 717 Miscellaneous Gene Families AT1G01580 59.353 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1325 K00521 - gmx:100790114 1053.89