Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1295 ATGGCACCGCCGAAACTGAAACGTAACTTCCCTCCGATAACTGAATGCAACAGAACTTCTTCGTCGCATGAATCCGTCGCCGCCGATCTCGATGGAACTCTTCTCATTTCTCGAAGCTCTTTTCCTTACTTCATGCTTGTTGCTGTTGAAGCCGGAAGTCTCCTCCGTGGCTTCATTCTTCTTCTCTCCCTTCCTTTTGTTATCATCGCTTATCTCTTTGTTTCTGAATCTTTCGGTATTCAGATGCTGATTTTCATCTCTTTCGCCGGTCTCAAAATTCGTGATATCGAACTCGCTTCACGCGCTGTTCTTCCAAGATTTTATGCTGCGGATGTGAGGAGAGAGAGTTTTGAAGTTTTTGATCGGTGTAAGAGGAAGGTAGTGGTGACGGCGAATCCGACGGTGATGGTGGATGCGTTTGTGAAGGATTATCTCGGCGGAGATAAGGTTTTGGGAACGGAAATTGAGGTGAATCCTAAGACGAAGAAGGCGACTGGATTTGTGAAGAAACCCGGTGTGCTTGTTGGAGATTTGAAGCGTTTGGCGGTTGAGAAAGAGTTTGGTGATGAATCGCCTGATGTTGGACTTGGAGATCGGAAAACTGATCATGATTTCATGTCAATATGCAAGGAAGGGTACATGGTACCTCCAAACAAATCAGCAAAACCAGTTCCACAAGAGCGTCTCAAGAGCCGAATCATCTTCCATGACGGCCGCTTCGTACAGCGTCCAGACCCACTAAACGCCATTATCACCTTTGCCTGGATCCCCTTTGGCTTCATCCTCTCCATCATCAGAGTTTACTTCAACCTCCCTCTCCCTGAACGCATAGTTCGTTACACCTACGAAATACTTGGCATCAAACTGGTAATCCGTGGCAACCGTCCTGCACCGCCTTCTCCAGGAACCCCCGGAAACCTTTATGTCTGCAACCACCGTAGCGCCCTCGACCCCATCGTCATCTCCATTGCCCTTGGCCGCAAAGTCTACTGTGTAACTTACAGTGTCAGCAAACTCTCCCGCTTCCTCTCACCAATCCCTGCCATCGCCCTCACCCGTGACCGTGCTGCTGATGCAGCCCGAATCACTGAGATTCTCCAAAAAGGTGACCTCGTTGTGTGCCCAGAAGGCACCACCTGTCGTGAGCCTTTCTTGCTACGTTTCAGTGCTCTATTTGCTGAGCTGAGTGATAGGATTGTCCCCGTAGCTGTTGATTGCAAGCAGAACATGTTTTATGGGACCACTGTTCGTGGAGTCAAATTCTGGGACCCTTATTTCTTTTTCATGAATCCTAGGCCTGTTTATGAGGTTAATTTCCTTGACCGGTTACCAGAAGAAATGTCGGTTAAAGCTGGTGGGAAATCTTCAATTGAGGTTGCTAATCATGTGCAGAAGGTTTTGGGGGATGTGCTTGGATTTGAGTGTACCAGTTTGACAAGGAAAGATAAGTATTTGTTGCTAGGAGGAAATGATGGGAAGGTGGAGTCGATGTATGGTGTCAAAAAGTGA 1509 0.4771 MAPPKLKRNFPPITECNRTSSSHESVAADLDGTLLISRSSFPYFMLVAVEAGSLLRGFILLLSLPFVIIAYLFVSESFGIQMLIFISFAGLKIRDIELASRAVLPRFYAADVRRESFEVFDRCKRKVVVTANPTVMVDAFVKDYLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGDLKRLAVEKEFGDESPDVGLGDRKTDHDFMSICKEGYMVPPNKSAKPVPQERLKSRIIFHDGRFVQRPDPLNAIITFAWIPFGFILSIIRVYFNLPLPERIVRYTYEILGIKLVIRGNRPAPPSPGTPGNLYVCNHRSALDPIVISIALGRKVYCVTYSVSKLSRFLSPIPAIALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFYGTTVRGVKFWDPYFFFMNPRPVYEVNFLDRLPEEMSVKAGGKSSIEVANHVQKVLGDVLGFECTSLTRKDKYLLLGGNDGKVESMYGVKK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1295 502 SMART plsc_2 306 407 IPR002123 GO:0016746
Tpr5g1295 502 Pfam haloacid dehalogenase-like hydrolase 27 206 - -
Tpr5g1295 502 PANTHER BNAC05G00450D PROTEIN 5 498 - -
Tpr5g1295 502 PANTHER ANCIENT UBIQUITOUS PROTEIN 5 498 - -
Tpr5g1295 502 Gene3D - 106 230 IPR023214 -
Tpr5g1295 502 CDD LPLAT 282 440 - -
Tpr5g1295 502 Pfam Acyltransferase 305 395 IPR002123 GO:0016746
Tpr5g1295 502 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 228 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1295 Tpr-Chr5 25420878 25425104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1295 1 502 Acyl Lipid Metabolism Gene Families AT4G00400 80.478 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1295 K13508 - gmx:100794137 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1295 5 25420878 25425104 Tpr5g1295 5 25420878 25425104 ECH