Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1280 ATGCAAAGGTATCATGCTGGCAGCTGCTCTAGTGCAGTGAATAGCAGTACCATAGGTGGACCATCCTCTAGGGACACCGGAAGATCTGATTCATCTTTTCCAGCTCACTTCCCTGTAAATTCAAGGCGACAACCACAGTTGAACTTAAACCCCTACAAATTGAAGTGTGATAAAGAAGCTTTGAACGCTAGGCTTGGGCCTCCAGATTTTCTTCCCCAAACTACAAATTGCCCTGAGGAGACTCTGACCAGAGAATATTTGGCATCTGGTTATAGGGATACAGTTGAGGGACTTGAGGAAGCTAGAGAAATTTCGTTGACCCAGGTTCCACATTTTAACAAGACAATTGTTCTTAATTGCAGAGAGGCAATTAAAAAACGTCTTAGAGCCATCAATGAATCCCGTGCACATAAAAGGAAGGCTGGTCAAGTATATGGTGTGCCTCTTTCAGGATTACAACTTGCCAAGACTGGTGTTTTCCCTGAACTAAGGCCGTGTGGCGAGGACTTCCGGAAGAAATGGATTGAGGGCTTATCTCAACCTCACAAGCGGTTACGTACTTTGACTGACCATGTTCCTCATGGTTATAAAAGGTCATCACTTTTGGAGGTTCTTATCAGGAATAATGTTCCTTTACTAAGGGCCACTTGGTTTGTAAAGGTTACTTACCTCAATCAGGTTCGGCCAGGTTCTGCTGCCATTTCTTCTGGGACTGCTGACAAAGTTCAGTTGTCTCGTACAGAGATTTGGACCAAAGATGTTATCCATTACTTGCAAACTCTTTTCGATGAATTTTTCTCAAAAAATACTTCTCATTCTACTCTTCATAATCGAGAGCGGTCACCACAAATGCCTTATGCTGGAACACTGCTGCACAAAAGTGATCCGTTATCATCTGTTTCTGGTGGGGAAGAGCCATCCTTACATTTTAGATGGCGGTATATTACCCGACTTTTGCAATGGCATCACGCCGAAGGGCTCATTCTTCCTTCTCTTGTTATTGACTGGGTTTTGAATCAACTGCAGGAAAAAGATCTGCTTGAGGTTTGGCAGCTGTTATTGCCTATAATATATGGCTTCTTAGAAATTGTTGTCCTCTCTCAAACCTATGTACGCGCTCTTGCTGGGTTAACTCTTCGTGTCATTCGTGATCCTGCTCCAGGTGGATCAGATCTAGTAGATAATTCCAGAAGGGCATATACAACATATGCTCTGATTGAGATGCTCCAATATTTAATACTTGCAGTGCCAGATACTTTTGTCGCATTGGATTGCTTTCCTTTACCATCCTCTGTAGTCTCACATACAATGAACGATGGCAGTTTTGTATTAAAATCAACTGAAGCTGTAGGGAAGATAAAGAATAGTTTAGATGATTTTGGTCGCATTGTTTCATGTATTCAGAAACGTGGGGAAGATCTTGCCAAGTCTGCAAGCCCTGGCAACCCAGGTCATTGTCTAGCTAAGGTTGCAAAAGCCTTGGATAAATCTCTAATGCTTGGTGATTTACGTGAAGCATACAACTTTCTTTTTGAAGATTTTTGTGATGGAACTGTATCTGAAGGTTGGACTGCAAAAGTGAGTCCTTGCTTAAGGTTGTCGCTGAAATGGTTTGGGACTGTAAATATGTCACTTATACATTCAGTGTTTTTCCTCTGCGAGTGGGCCACATGTGATTTTAGGGATTTTTGTACTACCCCTCCTTGTGACATTAAGTTTACAGGTAGGAAAGATCTTTCCCACGTGCACATAGCTGTTAGACTTTTGAAGATGAAACTGAGGGATGTGAAAATTTCATCAAGACGAACTAATCGAAGCATTCACAGAGCTAGTCAAAGGCATAATCAGAATTACATGACTACTGGTTCTTCAGTTATATCTGAAAGCCCTGGTCCTCTACATGATATTATAGTCTGTTGGATTGACCAGCATGTGGTGCACAAAGGGGAAGGTCTCAAGCGCCTACATTTATTTATAGTTGAACTAATACATGCAGGCATCTTTTACCCCTTGGCATATGTACGCCAGTTGATAGTGAGTGGGATCATGGATATGGATGCGAATATGGTTGACCTGGAGCGGCGAAAGAGACACTCTCACATCTTAAAGCAGCTGCCTGGGCACTTTATGCGAGATGCTTTGGCAGAAACTGGGATTGCTGACGGGCCGCTGCTCAGTGAGGCCTTGCAAATTTACTTGACTGAACGCCGCCTCATACTTCGTTCTTCTCCATGTGAGCTCCATGATGGTGCCAATAGTGCCAAAGTATCTACTTTGAAACGAAAACGGTATCCAGCTTCTTCAAAGAACGGTACTTCTGTAGTGTTAACTGGTCCGTGGAAAACTGCTCAAACCACAGTGTCTTCTAAAAGTTCAAAGGATGGTGCTAGTATTGAAGAAGTTAAAGAAACCATCTCTCTACTGTTACAACTACCCAGTAGTTTATCTAATTTAAACTCTACAGGATGTGTTGAATCTGAAGGCAGTGTTAGAAGACCCACCTGGCCTAATTACGGCAACATTGAACCAGTGGAGGGCACACCTGGTTGTGAAGAATGTAGAAGAGCAAAGAGACAAAAGTTAAGTGAGGAAAGAAGCTCATTTGTTCCAGGTGATGATGATACATGGTGGGTGAAAAAGGGGTCAAAACCCTCAGAACCTCTCAAAGTTGACCAGCCACAGAAGACAACCAAGCAGGTTACTAAGAGTCGTCAGAAGAATGTGCGTAAAATGAGTCTCGCTCAATTGGCAGCTTCTAGAATTGAGGGCAGCCAAGGGCCATCAACTAGTCATGTGTGTGATAATAAGGTAAGCTGCCCTCACCATAGAACTCCTATAGACGGAGATGCTCTAAGGTCTGTGGATAGCATACGAACAAGTAGCTCTAGGGATATTGTTTTCATTGGAAAAGCACTGAAGAGGCTACGTTTTGTTGAGAAAAGAGTTGTAGCAGTTTGGCTGCTGACTGTTGTTAAGCAGGCGATTGAAGAGACTGAAAAAAATATTGGCAAAGCTGGACAATTTGGCGGGGCTTATTCTATGGAGGATGATGGAAACTCAATACGGTGGAAACTTGGCGAAGATGAACTTTCTGCAATACTTTATTTGATAGACATCTCTGATGATTTGGTATCAGCTGTCAAGTTTCTCCTCTGGTTGATGCCGAGGGTTCTCAGCAGCCCCAGCTCTACTATTCATAGTGGGAGGAATGTTTTGATGCTACCAAGAAATGTGGAAAACCAAGTTTGTGACGTGGGGGAGGCTTTTCTGCTATCATCACTGAAAAGGTATGAGAACATTCTTGTTGCAGCAGACCTTATTCCTGAAGCTTTGTCACTTGCAATGCACCGTGCGGCCACTATCATTGCATCTAATGGAAGGGTGTCAAATTTAGGAGCCACAGCTTTTACTCGGTATTTATTGAAAAAGTACAGTAATGTTGCTAGTGTCATTGAGTGGGAGCAAACTTTTAAGTCTACATGTGATGCAAGACTCTCTGCCGAACTTGAGTCTGTCAGGTCAGTGGATGGAGAGTCAGGGTTACCCTTTGGAGTTCCTGCAGGAGTTGAGGACCCCGATGAATTTTTCCGTCAGAAGATAAGTGGTAGCCGGTTACCATCCAGAGTAGGCGCAGGCATGAGAGACATAGTGCAGCGTAATGTTGAAGAGGCTTTCCAATATCTTTTTGGAAAAGATAGGAAACTCTATGCTGCTGGTACACCAAAAGGTCATGCTTTAGAAAAATGGGATAATGGATATCAAATTGCTCAACAAATAGTTATGAGTTTGATCGACAGCATAAGACAGACTGGTGGTGCTGCTCAAGAAGGGGATCCCTCTTTGGTGTTGTCTGCGGTTTCTGCAATTGTTGGCAGTGTGGGTCCAACTTTAGCCAAAATGCCTGATTTTTCATCTGGCAATAATCAGTCAAGTATAGTGTCATTGAACTATGCCAGATGTATTCTGCGAATGCATATAACCTGTCTGCGCCTGCTTAAGGAAGCCCTGGGGGAACGCCAAAGCCGTGTCTTTGATATTGCTCTTGCAACTGAAGCTTCTAATGTTTTTGCTGGTGTTTTTGCTCCAAGTAAAGCATCTCGAGCTCAGTTTCAAATGTCTTCTTCTGAAGTCCATGATACTAGTGCCGCTGCTAATTCAAATGATGTGGGAAACAACTCTGTTAAAACTGTGGTTACAAAAGCAACAAAAATTGCTGCTGCTGTTTCTGCGCTTGTTGTTGGTGCAGTTATATATGGTGTTACCAGCCTGGAAAGAATGGTTACCATTCTCAGGTTAAAGGAGGGGCTAGATGTGATACATTGTATAAGAACCACAAGATCCAATTCAAATGGAAATGCCCGTTCAGTTGGGGCTTTTAAGGCAGATAATTCAATTGAAGTTCATGTCCACTGGTTTAGATTGCTTGTTGGAAACTGCAGAACCCTCTGTGATGGATTAGTGGTGAACCTATTGGGTGAACTATCTATTTCAGCTCTTTCAAGGATGCAACATATGCTTCCTCTAAGTCTGATTTTTCCACCTGCCTATTCAATATTTGCATTTGTTAGATGGCGGCCGTTCATTCTGAATGCTAATGTCGCAGTTCGTGAAGACATGAATCAACTTTATCAGTCTTTAACAATGGCCATAGCTGATGCTATAAAACATTTGCCTTTTCGTGATGTATGTTTTCGAGACTGTCAGGGGCTTTATGATCTTATGGCTGCAGATGGAAGTGATGCCGAATTTGCGGCCCTGCTAGAGTTGAATAGCTCTGATATGCATTTAAAATCCATGGCTTTTGTTCCTCTTCGTTCTAGGCTTTTTCTGAATGCCATGATTGATTGTAAGATGCCACCATCTATTTTGAACAAGGATGACGTGGGACGTGTATCCGGACCCGGTGAATCTAAAATCAAGTTTGCAAATGGTGATTCTAAGCTTCAGGATAAACTTGTGCATATTTTGGATACCTTGCAGCCTGCCAAATTTCACTGGCAGTGGGTTGCCCTCAGGCTGATTTTAAATGAACAAGCCCTCATCGAAAAACTGGAGGCACATGACGCATCTTTATCTGATGCCATACAATTGTCCTCACCTAGTCCGGAGAAGGCTGCTGCTGCTTCTGAGAATGAGAACAATTTCATTCAAATACTTCTTACTAGGTTACTGGGTAGACCTGATGCTGCACCTCTTTTTTCAGAGTTGGTTCATCTCTTTGGTAGGTCACTACAGGATTCGATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGACAAGATGTCCTCTTTGGTCGGAAGACCATTAGACAAAGACTACATAACATTGCTGAGAGTAAAGGACTTTCTGCTAAGATGCAGTATTCGGAGCCATGGGGTTGGTGTAGTCCTTGTATTGATCCAGTGACTATCAAAGGGGAAAAGAAGAAGTTTGATGCCACATCACTTGAAGAAGGAGAAGTTGTTGATGAGGGGATAGATCTGAAAAGGAGCCTAAAAGGGCTCTCTCAAGTGTTTGACTCTGATAGCTCAAGAATAAACCAGCAACATGTGACTGACAGAGCTCTTATTGATTTGCTTCTTCCTTGCATAGACCAAAGCTCTGCTGAATCTCGCAATTCCTTTGCGAATGATATGATGAAACAGTTAGGTAATATTGAGCTACAGATAGCTGCCGTTACAGGTGGAAGTAAGCCAGTGGGAAGTACTTCTCCTGGAGTTGAAGGCCAGACAAATAAAGTAAATACCAGGAAAAGTATAAGAGGTGGCGGCAACTCTGGATTAGCTAGGCGACCAGCAGTTGCAATAGATTCTTCTCCGCCGTCTCCTGCAGCCCTACGTGTTTCAATGTCACTTCGTTTGCAGTTACTCCTCAGATTTCTTCCTATTCTTTGCACCGAAAGAGAGCCATCTGTACGGAACATGAGACATTTTCTGGCCCCTGTAATTCTTCGTCTCCTAGGCAGTCGGGTTGTGCATGAGGATGCATATATTGTGGCAAATTCCATGCATTCTAAGAAGGATTTAGAGTCACCTTCTGAAGCTTCTTCTTCTGCATTTGTAGACTTTTCTGCTGTGGGTCTATTTGATCGTTTGCTGTTGGTTTTACATGCGTTATTGAGTAATTATCCTCCAAGTTGGCTTAGGCCGAAACCTGGTTCAAAGTCTATCAATGAACCTACAAAGGAAGTTTCTGGATTTGACCGAGAATTATTGGAGAGTATGCAGAATGATTTAGACCGTATGCAACTGCCTGATACTATCCGGTGGCGTATCCAAGCTGCAATGCCGGTACTTTTACCATCTACATGGTGCTCTTTCTCCTGCCAGCCTCCACCTGTACCAACATCTGCTCTTGTTTCTCTTCAAGCCAGCAATATTAACTTAAGTAATTTAGCTACCTCTCATAGGAACCCGGTCCTATCAAGGGTTGCAGCTAACGCATCAGGGAAGTCAAAACAACAGGATAGTAGTGAATTGGAAATTGATCCCTGGACGCTTTTAGAAGATGGTGCTGGATCCTGCCCTTCTGCAAGTAATACTGCTAGCATAGGAGGTGGTGATGCTAATCTCCGAGCTGCGAGCTGGCTTAAAGGGGCTGTAAGGGTGAGAAGGACAGACCTCACATATGTTGGTCCTGTGGATGACGATAGTTGA 6654 0.4316 MQRYHAGSCSSAVNSSTIGGPSSRDTGRSDSSFPAHFPVNSRRQPQLNLNPYKLKCDKEALNARLGPPDFLPQTTNCPEETLTREYLASGYRDTVEGLEEAREISLTQVPHFNKTIVLNCREAIKKRLRAINESRAHKRKAGQVYGVPLSGLQLAKTGVFPELRPCGEDFRKKWIEGLSQPHKRLRTLTDHVPHGYKRSSLLEVLIRNNVPLLRATWFVKVTYLNQVRPGSAAISSGTADKVQLSRTEIWTKDVIHYLQTLFDEFFSKNTSHSTLHNRERSPQMPYAGTLLHKSDPLSSVSGGEEPSLHFRWRYITRLLQWHHAEGLILPSLVIDWVLNQLQEKDLLEVWQLLLPIIYGFLEIVVLSQTYVRALAGLTLRVIRDPAPGGSDLVDNSRRAYTTYALIEMLQYLILAVPDTFVALDCFPLPSSVVSHTMNDGSFVLKSTEAVGKIKNSLDDFGRIVSCIQKRGEDLAKSASPGNPGHCLAKVAKALDKSLMLGDLREAYNFLFEDFCDGTVSEGWTAKVSPCLRLSLKWFGTVNMSLIHSVFFLCEWATCDFRDFCTTPPCDIKFTGRKDLSHVHIAVRLLKMKLRDVKISSRRTNRSIHRASQRHNQNYMTTGSSVISESPGPLHDIIVCWIDQHVVHKGEGLKRLHLFIVELIHAGIFYPLAYVRQLIVSGIMDMDANMVDLERRKRHSHILKQLPGHFMRDALAETGIADGPLLSEALQIYLTERRLILRSSPCELHDGANSAKVSTLKRKRYPASSKNGTSVVLTGPWKTAQTTVSSKSSKDGASIEEVKETISLLLQLPSSLSNLNSTGCVESEGSVRRPTWPNYGNIEPVEGTPGCEECRRAKRQKLSEERSSFVPGDDDTWWVKKGSKPSEPLKVDQPQKTTKQVTKSRQKNVRKMSLAQLAASRIEGSQGPSTSHVCDNKVSCPHHRTPIDGDALRSVDSIRTSSSRDIVFIGKALKRLRFVEKRVVAVWLLTVVKQAIEETEKNIGKAGQFGGAYSMEDDGNSIRWKLGEDELSAILYLIDISDDLVSAVKFLLWLMPRVLSSPSSTIHSGRNVLMLPRNVENQVCDVGEAFLLSSLKRYENILVAADLIPEALSLAMHRAATIIASNGRVSNLGATAFTRYLLKKYSNVASVIEWEQTFKSTCDARLSAELESVRSVDGESGLPFGVPAGVEDPDEFFRQKISGSRLPSRVGAGMRDIVQRNVEEAFQYLFGKDRKLYAAGTPKGHALEKWDNGYQIAQQIVMSLIDSIRQTGGAAQEGDPSLVLSAVSAIVGSVGPTLAKMPDFSSGNNQSSIVSLNYARCILRMHITCLRLLKEALGERQSRVFDIALATEASNVFAGVFAPSKASRAQFQMSSSEVHDTSAAANSNDVGNNSVKTVVTKATKIAAAVSALVVGAVIYGVTSLERMVTILRLKEGLDVIHCIRTTRSNSNGNARSVGAFKADNSIEVHVHWFRLLVGNCRTLCDGLVVNLLGELSISALSRMQHMLPLSLIFPPAYSIFAFVRWRPFILNANVAVREDMNQLYQSLTMAIADAIKHLPFRDVCFRDCQGLYDLMAADGSDAEFAALLELNSSDMHLKSMAFVPLRSRLFLNAMIDCKMPPSILNKDDVGRVSGPGESKIKFANGDSKLQDKLVHILDTLQPAKFHWQWVALRLILNEQALIEKLEAHDASLSDAIQLSSPSPEKAAAASENENNFIQILLTRLLGRPDAAPLFSELVHLFGRSLQDSMLLQAKWFLGGQDVLFGRKTIRQRLHNIAESKGLSAKMQYSEPWGWCSPCIDPVTIKGEKKKFDATSLEEGEVVDEGIDLKRSLKGLSQVFDSDSSRINQQHVTDRALIDLLLPCIDQSSAESRNSFANDMMKQLGNIELQIAAVTGGSKPVGSTSPGVEGQTNKVNTRKSIRGGGNSGLARRPAVAIDSSPPSPAALRVSMSLRLQLLLRFLPILCTEREPSVRNMRHFLAPVILRLLGSRVVHEDAYIVANSMHSKKDLESPSEASSSAFVDFSAVGLFDRLLLVLHALLSNYPPSWLRPKPGSKSINEPTKEVSGFDRELLESMQNDLDRMQLPDTIRWRIQAAMPVLLPSTWCSFSCQPPPVPTSALVSLQASNINLSNLATSHRNPVLSRVAANASGKSKQQDSSELEIDPWTLLEDGAGSCPSASNTASIGGGDANLRAASWLKGAVRVRRTDLTYVGPVDDDS* 2218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1280 2217 MobiDBLite consensus disorder prediction 1896 1933 - -
Tpr5g1280 2217 PANTHER RNA POLYMERASE II TRANSCRIPTION MEDIATORS PROTEIN 1 2217 - -
Tpr5g1280 2217 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2217 - -
Tpr5g1280 2217 MobiDBLite consensus disorder prediction 889 907 - -
Tpr5g1280 2217 SMART Med12_2 159 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
Tpr5g1280 2217 MobiDBLite consensus disorder prediction 879 907 - -
Tpr5g1280 2217 MobiDBLite consensus disorder prediction 1896 1921 - -
Tpr5g1280 2217 MobiDBLite consensus disorder prediction 1 44 - -
Tpr5g1280 2217 Pfam Transcription mediator complex subunit Med12 161 220 IPR019035 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1280 Tpr-Chr5 25190012 25204541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1280 - - gmx:100781696 3295.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1280 5 25190012 25204541 Tpr5g1280 5 25190012 25204541 ECH